DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ids and arsj

DIOPT Version :10

Sequence 1:NP_647814.1 Gene:Ids / 38423 FlyBaseID:FBgn0035445 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_688265.3 Gene:arsj / 559800 ZFINID:ZDB-GENE-111215-1 Length:568 Species:Danio rerio


Alignment Length:582 Identity:117/582 - (20%)
Similarity:183/582 - (31%) Gaps:223/582 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PPRRPNVVMVIFDD--LRPVIGAYGDTLASTPYLDNFARGSHIFTRVYSQQSLCAPSRNSLLTGR 83
            |..:|:::.::.||  .|.| |.:|..: .||.||..| .:.:....|..|.||:|||:.|:|||
Zfish    49 PNSQPHIIFIMVDDQGFRDV-GYHGSEI-KTPTLDRLA-AAGVKLENYYVQPLCSPSRSQLMTGR 110

  Fly    84 ---------------RPDTLHLYDFYSYWRTFTGNFTTLPQYFKEHGYYTYSCGKVFHPGL---- 129
                           :|:.|.|.:.            ||||..|..||.|:..|| :|.|.    
Zfish   111 YQIHTGLQHSIIRPTQPNCLPLENI------------TLPQKLKNAGYSTHMVGK-WHLGFYKRA 162

  Fly   130 -------------SSNNTDDYPLSWSAPAFRPRTEQFMNSPVCPDKEGI----LRKNLICPVELQ 177
                         |...:.||...:..                 |..|:    |.:......|..
Zfish   163 CMPTQRGFDTFFGSLLGSGDYYSHYKC-----------------DSPGLCGYDLHEGEEAAWEQD 210

  Fly   178 TQPYKTLPDIESVAEALRFVGSRSRHSQEPFFLAMGFHKPHINFRFPRQFLSRFNLSQFYNYTED 242
            ...|.|:...:.....|     .|.:.:.|.||.:.|...|...:.|.::|.|            
Zfish   211 RGVYSTIMYTQKAVNIL-----ASHNPKRPIFLYLAFQAVHSPLQVPARYLER------------ 258

  Fly   243 SLKPPDMPAVAWNPYTDVRARDDFKHSNISFPYGPISPLQAAQIRQSYYASVSYVDDLFGKLIGG 307
                                            |..|..|.    |:.|.|.||.:|:....|...
Zfish   259 --------------------------------YKSIPNLH----RRKYAAMVSCLDEAVRNLTLA 287

  Fly   308 LD----LDETVVVALGDHG---------WSLGEHAEWAKYSNFEVALRVPLIIRSPQFPVAQTKY 359
            |.    .|..|:|...|:|         |.|    ..:|.|.:|..:|....:.||......|| 
Zfish   288 LKQYGYYDNMVMVYSSDNGGQPMAGGSNWPL----RGSKGSYWEGGIRAVGFVHSPLLVKKGTK- 347

  Fly   360 YHGITELLDVFPTLVDLAGLPKLDKCQSSQELTCGEGKSLYHQLMGLGRADEHVALSQY------ 418
            ...:..:.|.:||||                            ::|.|..||:..|..|      
Zfish   348 SKALIHITDWYPTLV----------------------------MLGEGTLDENQNLDGYDVWEAI 384

  Fly   419 ------PRPGMLPTKHPNSDKPKLRN---------------IKIMGYSLRTDIYRYTMWV----- 457
                  ||..:|....|...|.|..:               :::..:.|.|.:..|:.|:     
Zfish   385 SEGRPSPRLDILHNIDPIYTKAKNGSWKAGYGIWNTAVQAALRVGDWKLLTGVPGYSDWIPPQTF 449

  Fly   458 -------RFHAQNFSRD-----WHDVYGEELYDHRLDSGEELNLMPLPQFDDVRQRLRRRLM 507
                   |:|.:..|.|     |       |::...|..|.::|.  .|:..|.:::..:|:
Zfish   450 STLLLANRWHNERVSWDRGKSVW-------LFNITADPYERVDLS--RQYPHVVKKMLFKLL 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IdsNP_647814.1 iduronate-2-sulfatase 24..495 CDD:293754 113/565 (20%)
arsjXP_688265.3 4-S 53..487 CDD:293753 112/559 (20%)

Return to query results.
Submit another query.