DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ids and Arsj

DIOPT Version :9

Sequence 1:NP_647814.1 Gene:Ids / 38423 FlyBaseID:FBgn0035445 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_775627.1 Gene:Arsj / 271970 MGIID:2443513 Length:598 Species:Mus musculus


Alignment Length:580 Identity:115/580 - (19%)
Similarity:182/580 - (31%) Gaps:224/580 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RPNVVMVIFDD--LRPVIGAYGDTLASTPYLDNFARGSHIFTRVYSQQSLCAPSRNSLLTGR--- 83
            :|:::.::.||  .|.| |.:|..: .||.||..| ...:....|..|.:|.|||:..:||:   
Mouse    73 QPHLIFILADDQGFRDV-GYHGSEI-KTPTLDKLA-AEGVKLENYYVQPICTPSRSQFITGKYQI 134

  Fly    84 ------------RPDTLHLYDFYSYWRTFTGNFTTLPQYFKEHGYYTYSCGKVFHPGLSSNNTDD 136
                        :|:.|.|            :..||||..||.||.|:..|| :|.|        
Mouse   135 HTGLQHSIIRPTQPNCLPL------------DNATLPQKLKEVGYSTHMVGK-WHLG-------- 178

  Fly   137 YPLSWSAPAFRPRTEQFMNSPVCPDKEGILRKNLICPVELQTQPYKTLPDIESVAEALRFVGSRS 201
                            |......|.|.|                :.|            |.||  
Mouse   179 ----------------FYRKDCMPTKRG----------------FDT------------FFGS-- 197

  Fly   202 RHSQEPFFLAMGFHKPHINFRFPRQFLSRFNLSQFYNYTEDSLKPPDMPAVAWN---------PY 257
                   .|..|.:..|.....|       .:..:..|..|:        .||:         .|
Mouse   198 -------LLGSGDYYTHYKCDSP-------GVCGYDLYENDN--------AAWDYDNGIYSTQMY 240

  Fly   258 TD-----VRARDDFKHSNISFPYGPI-SPLQAAQ------------IRQSYYASVSYVDDLFGKL 304
            |.     :...|..|...:...|..: |||||..            .|:.|.|.:|.:|:....:
Mouse   241 TQRVQQILATHDPTKPLFLYVAYQAVHSPLQAPGRYFEHYRSIININRRRYAAMLSCLDEAIHNV 305

  Fly   305 IGGLD----LDETVVVALGDHG---------WSLGEHAEWAKYSNFEVALRVPLIIRSPQFPVAQ 356
            ...|.    .:.::::...|:|         |.|    ..:|.:.:|..:|....:.||......
Mouse   306 TLALKRYGFYNNSIIIYSSDNGGQPTAGGSNWPL----RGSKGTYWEGGIRAVGFVHSPLLKNKG 366

  Fly   357 TKYYHGITELLDVFPTLVDLAGLPKLDKCQSSQELTCGEGKSLYHQLMGLGRADEHVALSQY--- 418
            | ....:..:.|.:|||:.||.                            |:.||.:.|..|   
Mouse   367 T-VCKELVHITDWYPTLISLAE----------------------------GQIDEDIQLDGYDIW 402

  Fly   419 ---------PRPGMLPTKHPNSDKPKLRN---------------IKIMGYSLRTDIYRYTMWVRF 459
                     ||..:|....|...|.|..:               |::..:.|.|....|:.||  
Mouse   403 ETISEGLRSPRVDILHNIDPIYTKAKNGSWAAGYGIWNTAIQSAIRVQHWKLLTGNPGYSDWV-- 465

  Fly   460 HAQNFS----RDWHD-----VYGEE--LYDHRLDSGEELNLMPLPQFDDVRQRLRRRLME 508
            ..|.||    ..||:     ..|:.  |::...|..|.::|.  .::..:.::|.|||.:
Mouse   466 PPQAFSNLGPNRWHNERITLSTGKSIWLFNITADPYERVDLS--SRYPGIVKKLLRRLSQ 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IdsNP_647814.1 AslA 21..509 CDD:225661 115/580 (20%)
iduronate-2-sulfatase 24..495 CDD:293754 111/565 (20%)
ArsjNP_775627.1 AslA 71..507 CDD:225661 110/560 (20%)
4-S 74..507 CDD:293753 110/559 (20%)
DUF4976 <493..>531 CDD:303608 8/33 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 532..598
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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