DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ids and Sgsh

DIOPT Version :9

Sequence 1:NP_647814.1 Gene:Ids / 38423 FlyBaseID:FBgn0035445 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_061292.2 Gene:Sgsh / 27029 MGIID:1350341 Length:502 Species:Mus musculus


Alignment Length:525 Identity:127/525 - (24%)
Similarity:193/525 - (36%) Gaps:120/525 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 NVVMVIFDDLRPVIGAYGDTLASTPYLDNFARGSHIFTRVYSQQSLCAPSRNSLLTGRRPDTLHL 90
            ||::::.||.....|.|.:|..:||:||..:|.|.||...::..|.|:|||.|||||.......:
Mouse    24 NVLLIVADDGGFESGVYNNTAIATPHLDALSRHSLIFRNAFTSVSSCSPSRASLLTGLPQHQNGM 88

  Fly    91 YDFYS---YWRTFTGNFTTLPQYFKEHGYYTYSCGKVFHPGLSSNNTDDYPLSWSAPAFRPRTEQ 152
            |..:.   ::.:| ....:||....:.|..|...||. |.|..:    .||..:   ||   ||:
Mouse    89 YGLHQDVHHFNSF-DKVQSLPLLLNQAGVRTGIIGKK-HVGPET----VYPFDF---AF---TEE 141

  Fly   153 FMNSPVCPDKEGILRKNLICPVELQTQPYKTLPDIESVAEALRFVGSRSRHSQEPFFLAMGFHKP 217
              ||.|......|.|...:....||||                        ...||||.:.||.|
Mouse   142 --NSSVMQVGRNITRIKQLVQKFLQTQ------------------------DDRPFFLYVAFHDP 180

  Fly   218 H-INFRFPR--QFLSRF-NLSQFYNYTEDSLKPPDMPAVAWNPYTDVRARDDFKHSNISFPY-GP 277
            | .....|:  .|..:| |......|..|           |.|..       :...::..|| .|
Mouse   181 HRCGHSQPQYGTFCEKFGNGESGMGYIPD-----------WTPQI-------YDPQDVMVPYFVP 227

  Fly   278 ISPLQAAQIRQSYYASVSYVDDLFG----KLIGGLDLDETVVVALGDHG--WSLGE-HAEWAKYS 335
            .:|...|.: .:.|.::..:|...|    :|.|...|::|:::...|:|  :..|. :..|...:
Mouse   228 DTPAARADL-AAQYTTIGRMDQGVGLVLQELRGAGVLNDTLIIFTSDNGIPFPSGRTNLYWPGTA 291

  Fly   336 NFEVALRVPLIIRSPQFPVAQTKYYHGITELLDVFPTLVDLAGLPKLDKC---QSSQELTCGEGK 397
            .       ||::.||:.|....:.......|||:.||::|...:|.....   ..:.:||   |:
Mouse   292 E-------PLLVSSPEHPQRWGQVSDAYVSLLDLTPTILDWFSIPYPSYAIFGSKTIQLT---GR 346

  Fly   398 SLYHQLMG-------LGRADEHVALSQYPRPGMLPTKHPNSDKPKLRNIKI-MGYSLRTDIY--- 451
            ||...|..       ......|.....||   |....|.|.  ..:.|:.. |.:.:..|.|   
Mouse   347 SLLPALEAEPLWATVFSSQSHHEVTMSYP---MRSVYHQNF--RLIHNLSFKMPFPIDQDFYVSP 406

  Fly   452 ------------RYTMWVR-FHAQNFSRDWHDVYGEELYDHRLDSGEELNLMPLPQFDDVRQRLR 503
                        |.|.|.: .|...:...|      ||||...|..|..||...|....|.:.|:
Mouse   407 TFQDLLNRTTTGRPTGWYKDLHRYYYRERW------ELYDISRDPRETRNLAADPDLAQVLEMLK 465

  Fly   504 RRLME 508
            .:|::
Mouse   466 AQLVK 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IdsNP_647814.1 AslA 21..509 CDD:225661 127/525 (24%)
iduronate-2-sulfatase 24..495 CDD:293754 124/510 (24%)
SgshNP_061292.2 AslA 20..464 CDD:225661 125/517 (24%)
SGSH 24..472 CDD:293751 127/525 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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