DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ids and sul-1

DIOPT Version :9

Sequence 1:NP_647814.1 Gene:Ids / 38423 FlyBaseID:FBgn0035445 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_508560.1 Gene:sul-1 / 180619 WormBaseID:WBGene00006308 Length:709 Species:Caenorhabditis elegans


Alignment Length:469 Identity:107/469 - (22%)
Similarity:181/469 - (38%) Gaps:104/469 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLSLMMPV------LLDAAAPPRRPNVVMVIFDDLRPVIGAYGDTLASTPYLDNFARGSHIFTRV 65
            :|.|::|:      .:|:     :.||::::.||....:|:. |.:..|..:.. .||:. ||..
 Worm    16 VLFLIIPIKVTSIHFVDS-----QHNVILILTDDQDIELGSM-DFMPKTSQIMK-ERGTE-FTSG 72

  Fly    66 YSQQSLCAPSRNSLLTGRRPDTLHLYDFYSYWRTFTGNFT-----------TLPQYFKEHGYYTY 119
            |....:|.|||:::|||       ||....:..|...|.|           ::..|.:|.||.|.
 Worm    73 YVTTPICCPSRSTILTG-------LYVHNHHVHTNNQNCTGVEWRKVHEKKSIGVYLQEAGYRTA 130

  Fly   120 SCGKVFHPGLSSNNTDDYPLSWSAPAFRPRTEQF----MNSPVCPDKEGILRKNLICPVELQTQP 180
            ..||.    |:..:....|..|.......:..:|    |||....:|.|         .|.:...
 Worm   131 YLGKY----LNEYDGSYIPPGWDEWHAIVKNSKFYNYTMNSNGEREKFG---------SEYEKDY 182

  Fly   181 YKTLPDIESVAEALRFVGSRSR-HSQEPFFLAMGFHKPHINFRFPRQFLSRFNLSQFYNYTEDSL 244
            :..|....|    |:|:....: .:.:||.|.:.:..||.......||...|. ::..:.|.   
 Worm   183 FTDLVTNRS----LKFIDKHIKIRAWQPFALIISYPAPHGPEDPAPQFAHMFE-NEISHRTG--- 239

  Fly   245 KPPDMPAVAWN--PYTDVR--ARDDFKHSNISFPYGPISPLQAAQIRQSYYASVSYVDDLFGKLI 305
                    :||  |..|.:  .:...|.:::...:..:...:..|..||....:..:.:|..:| 
 Worm   240 --------SWNFAPNPDKQWLLQRTGKMNDVHISFTDLLHRRRLQTLQSVDEGIERLFNLLREL- 295

  Fly   306 GGLDLDETVVVALGDHGWSLGEHAEW-AKYSNFEVALRVPLIIRSPQFPVAQTKYYHGITELLDV 369
              ..|..|..:...|||:.||:.... .|...:|..:|||..:|.|..|...|  ::.|...:|:
 Worm   296 --NQLWNTYAIYTSDHGYHLGQFGLLKGKNMPYEFDIRVPFFMRGPGIPRNVT--FNEIVTNVDI 356

  Fly   370 FPTLVDLAGLPKLDKCQSSQELTCGEGKSLYHQLMGLGRADEHVALSQYPRPGMLPTKHPNSD-- 432
            .||::.:||:||..:.         .|:||.          |.|||.:..:..|...| |..|  
 Worm   357 APTMLHIAGVPKPARM---------NGRSLL----------ELVALKKKKKKHMTALK-PWRDTI 401

  Fly   433 ------KPKLRNIK 440
                  .|||:.|:
 Worm   402 LIERGKMPKLKKIR 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IdsNP_647814.1 AslA 21..509 CDD:225661 103/449 (23%)
iduronate-2-sulfatase 24..495 CDD:293754 103/446 (23%)
sul-1NP_508560.1 G6S 34..376 CDD:293766 89/394 (23%)
AslA 36..>381 CDD:225661 92/407 (23%)
ALP_like <605..654 CDD:304875
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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