DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ids and Arsa

DIOPT Version :9

Sequence 1:NP_647814.1 Gene:Ids / 38423 FlyBaseID:FBgn0035445 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_033843.2 Gene:Arsa / 11883 MGIID:88077 Length:506 Species:Mus musculus


Alignment Length:548 Identity:126/548 - (22%)
Similarity:193/548 - (35%) Gaps:177/548 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LSLMMPVLLDAAAPPRRPNVVMVIFDDL-RPVIGAYGDTLASTPYLDNFARGSHIFTRVYSQQSL 71
            |.|.:...|..|:|   ||::::..||| ...:|:||...::||.||..|.|...||..|...||
Mouse     6 LFLALAAGLSTASP---PNILLIFADDLGYGDLGSYGHPSSTTPNLDQLAEGGLRFTDFYVPVSL 67

  Fly    72 CAPSRNSLLTGRRPDTLHLYDFYSYWRTFTG---NFTTLPQYFKEHGYYTYSCGKVFHPGLSSNN 133
            |.|||.:|||||.|....:|.......:..|   ...||.:.....||.|...|| :|.|:....
Mouse    68 CTPSRAALLTGRLPVRSGMYPGVLGPSSQGGLPLEEVTLAEVLAARGYLTGMAGK-WHLGVGPEG 131

  Fly   134 TDDYPLSWSAPAFRPRTE---QFMNSPVCPDK--------------------EGILRKNLICPVE 175
                       ||.|..:   :|:..|...|:                    :|::...|:..:.
Mouse   132 -----------AFLPPHQGFHRFLGIPYSHDQGPCQNLTCFPPDIPCKGGCDQGLVPIPLLANLT 185

  Fly   176 LQTQPYKTLPDIESVAEALRFVG-SR-----SRHSQEPFFLAMGFHKPHINFRFPRQFLSRFNLS 234
            ::.|| ..||.:|:     |:|. ||     ::....||||....|..|    :| ||..:    
Mouse   186 VEAQP-PWLPGLEA-----RYVSFSRDLMADAQRQGRPFFLYYASHHTH----YP-QFSGQ---- 235

  Fly   235 QFYNYTEDSLKPPDMPAVAWNPYTDVRARDDFKHSNISFPYGPISPLQAAQIRQSYYASVSYVDD 299
               ::|:.|.:         .|:.|                                 |:..:|.
Mouse   236 ---SFTKRSGR---------GPFGD---------------------------------SLMELDG 255

  Fly   300 LFGKL---IGGLD-LDETVVVALGDHGWSLGEHA--------EWAKYSNFEVALRVPLIIRSPQF 352
            ..|.|   :|.|. |:||:|:...|:|..|...:        ...|.:.||..:|.|.::..|..
Mouse   256 AVGALMTTVGDLGLLEETLVIFTADNGPELMRMSNGGCSGLLRCGKGTTFEGGVREPALVYWPGH 320

  Fly   353 PVAQTKYYHGITELLDVFPTLVDLAGLP----KLDKCQSSQELTCGEGKSLYHQLMGLGRADEHV 413
            ......  |.:...||:.|||..|.|.|    .||            |..:...|:|.|::....
Mouse   321 ITPGVT--HELASSLDLLPTLAALTGAPLPNVTLD------------GVDISPLLLGTGKSPRKS 371

  Fly   414 ALSQYPRPGMLPTKHPNSDKPKLRNIKIMG-YSLRTDIYRYTMWVR------------FHAQNFS 465
            .....|.|.                 :|.| :::|...|:...:.:            .||.|  
Mouse   372 VFFYPPYPD-----------------EIHGVFAVRNGKYKAHFFTQGSAHSDTTSDPACHAAN-- 417

  Fly   466 RDWHDVYGEE---LYDHRLDSGEELNLM 490
                .:...|   |||...|.||..|::
Mouse   418 ----RLTAHEPPLLYDLSQDPGENYNVL 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IdsNP_647814.1 AslA 21..509 CDD:225661 122/535 (23%)
iduronate-2-sulfatase 24..495 CDD:293754 121/532 (23%)
ArsaNP_033843.2 AslA 16..440 CDD:225661 122/535 (23%)
ALP_like 19..502 CDD:304875 122/535 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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