DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ids and arsk

DIOPT Version :9

Sequence 1:NP_647814.1 Gene:Ids / 38423 FlyBaseID:FBgn0035445 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_017946283.2 Gene:arsk / 100485065 XenbaseID:XB-GENE-1000369 Length:536 Species:Xenopus tropicalis


Alignment Length:543 Identity:130/543 - (23%)
Similarity:223/543 - (41%) Gaps:102/543 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MITARLLLSLMMPVLLDAAAP-----------PRRP--NVVMVIFD------DLRPVIGAYGDTL 46
            ||...:.:||    .|.:|.|           |..|  |||||:.|      .|.|     ..:|
 Frog     1 MIQKCIAVSL----FLFSAVPEDIPVRALSLSPNSPKHNVVMVMSDAFDGRLTLLP-----EKSL 56

  Fly    47 ASTPYLDNFARGSHIFTRVYSQQSLCAPSRNSLLTGRRPDTLHLYDFYSYWRTFTGNFTTLPQYF 111
            .|.||::...:...:|...|:...:|.|||.::.:|..|   ||.:.::.::.....:.|.....
 Frog    57 VSLPYINFMKQHGALFLNAYTNSPICCPSRAAMWSGLFP---HLTESWNNYKCLNSEYPTWMDKV 118

  Fly   112 KEHGYYTYSCGKVFHPGLS---SNNTDDYPLSWSAPAFRPRTEQFMNSPVCPDKEGILRKNLICP 173
            :::||.|...||..:...|   ||..:    :|:           .:.|....:||....||   
 Frog   119 EKNGYVTQRLGKQDYTSGSHSLSNRVE----AWT-----------RDVPFLLRQEGRPCANL--- 165

  Fly   174 VELQTQPYKTLPDIESVAEALRFVGSRSRHSQEPFFLAMGFHKPHINFRFPRQ-----FLSRFNL 233
            ...:||......|.::...|..::...:::|.:||||.:|.:.||   .:|.:     |.|...|
 Frog   166 TGNKTQTRVMTQDWKNADTAAGWIQKAAQNSSQPFFLYLGLNLPH---PYPSENMGENFGSSTFL 227

  Fly   234 SQFYNYTEDSLKPPDMPAVAWNPYTDVRARDDFKH--SNISFPYGPISPLQAAQIRQSYYASVSY 296
            :..|...:.|.|...:|  .|.|...:...|.:..  .|.:.|:   :..:...||.:|||..:.
 Frog   228 TSSYWLQKVSYKNVTVP--EWKPLQSMHPVDYYSSYTKNCTAPF---TDQEIRDIRANYYAMCAE 287

  Fly   297 VDDLFGKLIGGLD----LDETVVVALGDHGWSLGEHAEWAKYSNFEVALRVPLIIRSPQFPVAQT 357
            .|.|.|::|..|:    |..|.||...|||....||.::.|.|.:|.:..|||:|..|  .::..
 Frog   288 ADGLLGEIISALNDTGLLSRTYVVFTSDHGELAMEHRQFYKMSMYEGSSHVPLLIMGP--GISPG 350

  Fly   358 KYYHGITELLDVFPTLVDLAGLPKLDKCQSSQELTCGEGKSLYHQLMGLGRADEHVALSQYPRPG 422
            :....|..|:|::||::::||:      |..|.::   |.||...|.  .|::::|.......|.
 Frog   351 QQISTIVSLVDLYPTMLEIAGV------QIPQNIS---GFSLMPLLS--ARSEKNVPSCTNAHPN 404

  Fly   423 MLPTKHPNSDKPKLRNIKIMGYSLRTDIYRYTMWVRFHAQNFSRDWHDVYGEELYDHRLDSGEEL 487
            ...::...||      .....|.||.:.::|..:.         |...|. .:|:|...|..|..
 Frog   405 WALSEFHGSD------ANASTYMLRDNYWKYIAYA---------DGDSVI-PQLFDLSSDPDELR 453

  Fly   488 NLMPLPQFDDVRQRLRRRLMEMV 510
            |:  ..|..:..|.:.::|..::
 Frog   454 NV--AAQVPEKVQEMDKKLRSII 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IdsNP_647814.1 AslA 21..509 CDD:225661 124/520 (24%)
iduronate-2-sulfatase 24..495 CDD:293754 119/492 (24%)
arskXP_017946283.2 ARSK 35..450 CDD:293781 116/477 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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