DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ids and arsia

DIOPT Version :9

Sequence 1:NP_647814.1 Gene:Ids / 38423 FlyBaseID:FBgn0035445 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_002664306.1 Gene:arsia / 100329483 ZFINID:ZDB-GENE-140106-141 Length:558 Species:Danio rerio


Alignment Length:597 Identity:116/597 - (19%)
Similarity:190/597 - (31%) Gaps:205/597 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ITARLLLSLMMPVLLDAA-------APPR-------RPNVVMVIFDDLRPVIGAYGDTLASTPYL 52
            :..|.||:|.:...|.||       .|.:       ||:::.::.||.......|.:|...||.|
Zfish     1 MAVRALLALSVLAYLGAADLTQDWTGPNQVEQPNHARPHIIFIMTDDQGFNDIGYHNTDIHTPTL 65

  Fly    53 DNFARGSHIFTRVYSQQSLCAPSRNSLLTGRRPDTLHLYDFYSYWRTFTG--------------- 102
            |..| .:.:....|..|.:|.|||:..:|||             ::..||               
Zfish    66 DRLA-AAGVKLENYYIQPICTPSRSQFITGR-------------YQIHTGLQHSIIRSRQPSCLP 116

  Fly   103 -NFTTLPQYFKEHGYYTYSCGKVFHPGLSSNNTDDYPLSWSAPAFRPRTEQFMNSPVCPDKEGI- 165
             ...||||..:|.||.|:..|| :|.|                        |......|.:.|. 
Zfish   117 FGLRTLPQRLQEAGYATHMVGK-WHLG------------------------FYKRDCLPTRRGFN 156

  Fly   166 -LRKNLICPVELQTQPYKT----------LPDIESVA-------------EALRFVGSRSRHSQE 206
             ...:|...|:..|  ||:          |.|.|.||             :.:|.:.:....|.:
Zfish   157 TYFGSLTGSVDYYT--YKSCDGPKVCGFDLHDGERVAWGQGGRYSTHLYTQRVRKILAAHDPSSQ 219

  Fly   207 PFFLAMGFHKPHINFRFPRQFLSRFNLSQFYNYTEDSLKPPDMPAVAWNPYTDVRARDDFKHSNI 271
            |.|:.:.|...|...:.|::::                                           
Zfish   220 PLFIFLSFQAVHTPLQSPKEYV------------------------------------------- 241

  Fly   272 SFPYGPISPLQAAQIRQSYYASVSYVDDLFGKLIGGLD----LDETVVVALGDHG---------W 323
             :||..:..:    .|:.|...||.||:....:...|.    ...||:....|:|         |
Zfish   242 -YPYRRMGNM----FRRKYAGMVSAVDEAVRNVTYALRKYGYYKNTVIFFSTDNGGQPLFGGSNW 301

  Fly   324 SLGEHAEWAKYSNFEVALRVPLIIRSPQFPVAQTKYYHGITELLDVFPTLVDLAGLPKLDKCQSS 388
            .|    ...|.:.:|..:|....:.||... .:.:....:..:.|.:|||:.|||    .....:
Zfish   302 PL----RGRKGTYWEGGVRGIGFVHSPLLR-RRRRVSRALIHITDWYPTLMRLAG----GNVSQA 357

  Fly   389 QEL-------TCGEGK-----SLYHQLMGLGRADEHVALSQYPRPGMLPTKHPNSDKPKLRNIKI 441
            :.|       |..:||     .:.|.:..|..|..|         |.|...:...:......:::
Zfish   358 EGLDGFDMWDTISDGKESPRFEILHNIDPLYNAARH---------GSLKNGYGIWNTAVQAAVRV 413

  Fly   442 MGYSLRTDIYRYTMWVRFH-AQNFSRDWHDVYGEELYDHRLDSGEELNLM-----PLPQFD---- 496
            ..:.|.|....|..|:... ..||...|..:      :...::.:.|.|.     |..:||    
Zfish   414 GDWKLLTGNPGYGDWIPPQMLGNFPESWWSL------ERHTEAKKSLWLFNVADDPYERFDLAER 472

  Fly   497 --DVRQRLRRRL 506
              ||.::|..||
Zfish   473 RPDVVKQLLARL 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IdsNP_647814.1 AslA 21..509 CDD:225661 109/571 (19%)
iduronate-2-sulfatase 24..495 CDD:293754 101/542 (19%)
arsiaXP_002664306.1 AslA 37..471 CDD:225661 103/546 (19%)
4-S 38..470 CDD:293753 102/544 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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