DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12010 and AFG2B

DIOPT Version :10

Sequence 1:NP_728878.1 Gene:CG12010 / 38421 FlyBaseID:FBgn0035443 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_076968.2 Gene:AFG2B / 79029 HGNCID:28762 Length:753 Species:Homo sapiens


Alignment Length:775 Identity:247/775 - (31%)
Similarity:377/775 - (48%) Gaps:117/775 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHHNQSDFPTFPLSL---LDDSDLEPQRCYI-PAWENSTGT---GWYRCHLCDGSYAVCWVTPRA 58
            |..:...||..||..   ||..|...|||.: ||..::.|.   ...:..|.||...:|...||.
Human     1 MAPDSDPFPEGPLLKLLPLDARDRGTQRCRLGPAALHALGARLGSAVKISLPDGGSCLCTAWPRR 65

  Fly    59 GS-------ETCCFLDGIVTSLTRFSPTNQRLVLLEPLKLVPC--VKRI---------------- 98
            ..       :..|...|.....:|    ::|.:.|..|.||||  ::|:                
Human    66 DGADGFVQLDPLCASPGAAVGASR----SRRSLSLNRLLLVPCPPLRRVAVWPVLRERAGAPGAR 126

  Fly    99 --SCVITVTQELLQRPPVSLEDL---KDDVRIFLRHLKLTKGCS-------VQHRRLVQLGIASV 151
              :.|:...||||:..|:||..:   .......:..|.:..|..       |..|..|.||    
Human   127 NTAAVLEAAQELLRNRPISLGHVVVAPPGAPGLVAALHIVGGTPSPDPAGLVTPRTRVSLG---- 187

  Fly   152 EIFDAPGVADDECFEIAHDAELLLADIRLGMPFSLDFIFKY--LPHSFERPMEQLEKLLETSKIS 214
              .:.|..|..:       .|:.|.    |:..:.|.:.:.  ||..:.|.:..|...:      
Human   188 --GEPPSEAQPQ-------PEVPLG----GLSEAADSLRELLRLPLRYPRALTALGLAV------ 233

  Fly   215 FSHRFPTTALVVGPVDCGKSGLLSEFLRRHSCNCFYITASQVLRSYPGETEEELRRIFQAAQTFK 279
                 |...|:.||...||:.|:....|........::|..:..|.||||||.:||:||.|:   
Human   234 -----PRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGSRPGETEENVRRVFQRAR--- 290

  Fly   280 EKLRPLLPIVILIEDLELLCPSTAVADAKNSSNSLRISAELYKLLDAL--PRGIICLATSGVPDS 342
             :|....|.::.:::::.|||...     :.:...|:.|::..|||..  .|.::.:..:..||:
Human   291 -ELASRGPSLLFLDEMDALCPQRG-----SRAPESRVVAQVLTLLDGASGDREVVVVGATNRPDA 349

  Fly   343 LHEHARR--RFVREVTINMPSEGQRRQLVEHLCEVHELNISQTLLEHIARNTQGYVIADLTLLLR 405
            |....||  ||.|||.|..|:..||:::::.:.....:: |...|..:|..|.|||.||||.|.|
Human   350 LDPALRRPGRFDREVVIGTPTLKQRKEILQVITSKMPIS-SHVDLGLLAEMTVGYVGADLTALCR 413

  Fly   406 RVQQQLL-----TKDDFDIEHI-FLKSLSQTQPSASRSTDVRVSKMTAGFEVIGGMEALKRTLQV 464
            ......|     .:|:..|:.| ||::....|||:.||....:......:|.|||:|.:|..|:.
Human   414 EAAMHALLHSEKNQDNPVIDEIDFLEAFKNIQPSSFRSVIGLMDIKPVDWEEIGGLEDVKLKLKQ 478

  Fly   465 SVLAGIRQSAAFARFGLSLPKGVLLYGPPGCAKTTVAKCLAKEADMTFIATSAAEVYSPYVGCAE 529
            |:...::....|.|.||:.||||||||||||||||:.:.||.....:|::.|.|:::||:||.:|
Human   479 SIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSE 543

  Fly   530 RFISRIFDTARKNAPCLIFLDEIDSLVGRRTVSSGGGGGQVQLRILSTLLTEMNGI-------VG 587
            :.:|:||..||.:.|.::|||||||::|.|:.|.  .|..||.|:||.||.|::|:       .|
Human   544 KVLSQIFRQARASTPAILFLDEIDSILGARSASK--TGCDVQERVLSVLLNELDGVGLKTIERRG 606

  Fly   588 GGSQQH---------ILVVAATNRPDMIDDALLRPGRFDKLIHVPAPDEKSRLALLKLHSQRMPF 643
            ..|.|.         ::::|||||||::|.|||||||.||:|::|.||.|.||::||:.::.||.
Human   607 SKSSQQEFQEVFNRSVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPI 671

  Fly   644 HENVFLQEIAARTDRYSGADLCNLCNEAAIEAFQRD-FKATEIELQDFEKVLTKQKSSLT 702
            ..:|.|:.:||.|..:|||||.|||.|||:.|.|.: ..||.::.:.|.|.|...|.||:
Human   672 GPDVSLENLAAETCFFSGADLRNLCTEAALLALQENGLDATTVKQEHFLKSLKTVKPSLS 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12010NP_728878.1 CDC48 <220..713 CDD:273521 191/510 (37%)
AFG2BNP_076968.2 Required for interaction with AFG2A and CINP. /evidence=ECO:0000269|PubMed:38554706 1..189 46/197 (23%)
CDC48 22..746 CDD:273521 240/754 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..203 8/44 (18%)

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