DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12010 and Fign

DIOPT Version :10

Sequence 1:NP_728878.1 Gene:CG12010 / 38421 FlyBaseID:FBgn0035443 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_068362.1 Gene:Fign / 60344 MGIID:1890647 Length:759 Species:Mus musculus


Alignment Length:403 Identity:105/403 - (26%)
Similarity:178/403 - (44%) Gaps:75/403 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 MPSEGQRR-------------------QLVEHLCEVHELNISQTLLEH-------IARNTQGYVI 397
            ||||.||:                   .|.....|......|..:.||       :|...||..:
Mouse   383 MPSEQQRKFSSQSSRALTPPSYSTAKNSLGSRSSESFGKYTSPVMSEHGDDHRQLLAHPIQGPGL 447

  Fly   398 ADLTLLLRRVQQQLLTKDDFDIEHIFLKSLSQTQPSASRSTDVRVSKMTAGFEVIGGMEALKRTL 462
            ...|.....|.:||...|...|:.:..:.::|..|              ..:..|.|::.:|..:
Mouse   448 RAATSSNHSVDEQLKNTDTHLIDLVTNEIITQGPP--------------VDWSDIAGLDLVKAVI 498

  Fly   463 QVSVLAGIRQSAAFARFGL-SLPKGVLLYGPPGCAKTTVAKCLAKEADMTFIATSAAEVYSPYVG 526
            :..||..:.:|.||:  || :||:.:||:||.|..||.:.:|:|.:...||...:.:.:.:.::|
Mouse   499 KEEVLWPVLRSDAFS--GLTALPRSILLFGPRGTGKTLLGRCIASQLGATFFKIAGSGLVAKWIG 561

  Fly   527 CAERFISRIFDTARKNAPCLIFLDEIDSLVGRRTVSSGGGGGQVQ---LRILSTLLTEMNGIVGG 588
            .||:.|...|..||...|.:||:.:||.|:..:.........:::   |..|.|:||        
Mouse   562 EAEKIIHASFLVARCRQPSVIFVSDIDMLLSSQVSEEHSPVSRMRTEFLMQLDTVLT-------- 618

  Fly   589 GSQQHILVVAATNRPDMIDDALLRPGRFDKLIHVPAPDEKSR----LALLKLHSQRMPFHENVFL 649
            .::..|:|:.||::|:.||::|.|  .|.|.:.:|.||..:|    :.||..|:..:...|...|
Mouse   619 SAEDQIVVICATSKPEEIDESLRR--YFMKRLLIPLPDSTARHQIIVQLLTQHNYCLNDKEFALL 681

  Fly   650 QEIAARTDRYSGADLCNLCNEAAIEAFQRDFKATE-----------IELQDFEKVLTKQKSSLTQ 703
            .:   ||:.:||.|:.:||.|||:..... ..||:           :..||||....|.:.|::|
Mouse   682 VQ---RTEGFSGLDVAHLCQEAAVGPLHA-MPATDLSAIMPSQLRPVTYQDFENAFCKIQPSISQ 742

  Fly   704 SQIDGYYKFAYRF 716
            .::|.|.::...|
Mouse   743 KELDMYVEWNKMF 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12010NP_728878.1 CDC48 <220..713 CDD:273521 104/398 (26%)
FignNP_068362.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..111
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 200..237
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 258..293
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 337..429 9/45 (20%)
RecA-like_fidgetin 487..650 CDD:410931 52/174 (30%)
AAA_lid_3 675..>706 CDD:465537 12/33 (36%)
Vps4_C <723..756 CDD:462762 10/33 (30%)
Blue background indicates that the domain is not in the aligned region.

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