DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12010 and drc11

DIOPT Version :10

Sequence 1:NP_728878.1 Gene:CG12010 / 38421 FlyBaseID:FBgn0035443 Length:717 Species:Drosophila melanogaster
Sequence 2:XP_073809094.1 Gene:drc11 / 553364 ZFINID:ZDB-GENE-050208-768 Length:846 Species:Danio rerio


Alignment Length:312 Identity:70/312 - (22%)
Similarity:120/312 - (38%) Gaps:73/312 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   436 RSTDVRVSKMTAGFEVIGGMEALKRTLQ------VSVLAGIRQSAAFARFGLSLPKG-------- 486
            |..:|::|      :.||....|..||:      :..|:.:||  ..|.:|: ||.|        
Zfish   515 RPMNVKLS------DYIGEYSYLGTTLRQADIEPMPSLSDVRQ--LIALYGI-LPLGSQCVHERG 570

  Fly   487 -----VLLYGPPGCAKTTVAKCLAKEADMTFIATSAAEVYSPYVGCA--ERFISRIFDTARKNAP 544
                 :||.||.|..|..:...|..|........|.:.:...|.|.:  :..:..:|..||:..|
Zfish   571 PLIRALLLTGPQGVGKKMLVHALCTETGANLFNLSPSTLAGKYPGKSGLQLLLHMVFKVARQLQP 635

  Fly   545 CLIFLDEIDSLVGRRTVSSGGGGGQVQL---RILSTLLTEMNGIVGGGSQQHILVVAATNRPDMI 606
            .:|::.:.:....::....     :.::   |:..||...:..|   .::..:|||..:.||   
Zfish   636 SVIWIGDAEKTFYKKVPKL-----EKEMEPKRLKKTLPKILKSI---KAEDRVLVVGTSRRP--- 689

  Fly   607 DDALLRP--GRFDKLIHVPAPDEKSRLALLK--LHSQRMPFHENVFLQEIAARTDRYSGADLCNL 667
            .||.::|  ..:.|:|.:|.||..||..|.|  |.:........:.|..:|..||.|:...:   
Zfish   690 FDADIKPFCKVYKKIILIPRPDYASRFTLWKELLQAHGALLDPKLDLSSLAKVTDGYTQGHI--- 751

  Fly   668 CNEAAIEAFQRDFKATEIELQ--------DFEKVLTKQKSSLTQSQIDGYYK 711
                 ::|.|.......:|||        :|...|.:|         |..||
Zfish   752 -----LQAIQTILIPHRLELQAKRPLTAVEFIPPLARQ---------DPVYK 789

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12010NP_728878.1 CDC48 <220..713 CDD:273521 70/312 (22%)
drc11XP_073809094.1 None

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