DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12010 and PEX1

DIOPT Version :10

Sequence 1:NP_728878.1 Gene:CG12010 / 38421 FlyBaseID:FBgn0035443 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_000457.1 Gene:PEX1 / 5189 HGNCID:8850 Length:1283 Species:Homo sapiens


Alignment Length:660 Identity:178/660 - (26%)
Similarity:300/660 - (45%) Gaps:139/660 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 TVTQELLQRPPVSLEDLKDDVRIFLRHLKLTKGCSVQHRRLVQLGIASVEIFDAPGVADDECFEI 167
            |..|.||.  |:..|:..:::...|..|||:....|.     .||::|:|             .|
Human   526 TTIQVLLD--PMVKEENSEEIDFILPFLKLSSLGGVN-----SLGVSSLE-------------HI 570

  Fly   168 AHDAELLLADIRLGMPFSLDFIFKYLPHSFERPMEQLEKLLETSKISFSHRFPTTALVVGPVDCG 232
            .|..        ||.|.|             |.:..|...|....:          |:.|....|
Human   571 THSL--------LGRPLS-------------RQLMSLVAGLRNGAL----------LLTGGKGSG 604

  Fly   233 KSGL-----------LSEFLRRHSCNCFYITASQVLRSYPGETEEELRRIFQAAQTFKEKLRPLL 286
            ||.|           |...:.|..|        :.||   |:..|.:::..:.|  |.|.:. :.
Human   605 KSTLAKAICKEAFDKLDAHVERVDC--------KALR---GKRLENIQKTLEVA--FSEAVW-MQ 655

  Fly   287 PIVILIEDLELLCPSTAVADAKNSSNSLRISAELYKLLDALPRGI------ICLATSGVPDSLH- 344
            |.|:|::||:|:....||.:.::|.::::.....:.|.|.:...|      ..:|||....||| 
Human   656 PSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEFISMGSLVALIATSQSQQSLHP 720

  Fly   345 --------------EHARRRFVREVTINMPSEGQRRQLVEHL------CEVHELNISQTLLEHIA 389
                          :|          |..|::.||.:::.::      |::::  .:...|:|:|
Human   721 LLVSAQGVHIFQCVQH----------IQPPNQEQRCEILCNVIKNKLDCDINK--FTDLDLQHVA 773

  Fly   390 RNTQGYVIADLTLLLRRV------QQQLLTKDDFDIEHI-FLKSLSQTQPSASRSTDVRVSKMTA 447
            :.|.|:|..|.|:|:.|.      :|.:.|::...:..: |.|:|....|::.||.::...: ..
Human   774 KETGGFVARDFTVLVDRAIHSRLSRQSISTREKLVLTTLDFQKALRGFLPASLRSVNLHKPR-DL 837

  Fly   448 GFEVIGGMEALKRTLQVSVLAGIRQSAAFARFGLSLPKGVLLYGPPGCAKTTVAKCLAKEADMTF 512
            |::.|||:..:::.|..::....:....||...:....|:|||||||..||.:|..:|:|:.|.|
Human   838 GWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNF 902

  Fly   513 IATSAAEVYSPYVGCAERFISRIFDTARKNAPCLIFLDEIDSLVGRRTVSSGGGGGQVQLRILST 577
            |:....|:.|.|:|.:|:.:..||..|:...||::|.||.:|:..||...:.|    |..|:::.
Human   903 ISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTG----VTDRVVNQ 963

  Fly   578 LLTEMNGIVGGGSQQHILVVAATNRPDMIDDALLRPGRFDKLIHVPAPDEKSRLALLKLHSQRMP 642
            |||:::|:.|   .|.:.|:|||:|||:||.|||||||.||.::.|.||:.|||.:|.:.|..:|
Human   964 LLTQLDGVEG---LQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLP 1025

  Fly   643 FHENVFLQEIAARTDRYSGADLCNLCNEAAIEA---------FQRDFKATEIELQDFEKVLTKQK 698
            ..::|.||.:|:.||.::||||..|...|.:||         .|....:::.:|.....|.....
Human  1026 LADDVDLQHVASVTDSFTGADLKALLYNAQLEALHGMLLSSGLQDGSSSSDSDLSLSSMVFLNHS 1090

  Fly   699 SSLTQSQIDG 708
            |....|..||
Human  1091 SGSDDSAGDG 1100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12010NP_728878.1 CDC48 <220..713 CDD:273521 154/543 (28%)
PEX1NP_000457.1 PEX-2N 17..98 CDD:462730
PEX-1N 104..179 CDD:462729
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 346..367
CDC48 <595..1065 CDD:273521 147/513 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1260..1283
Blue background indicates that the domain is not in the aligned region.

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