DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12010 and Pex1

DIOPT Version :9

Sequence 1:NP_728878.1 Gene:CG12010 / 38421 FlyBaseID:FBgn0035443 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster


Alignment Length:684 Identity:167/684 - (24%)
Similarity:301/684 - (44%) Gaps:98/684 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 QELLQRPPVSLEDLKDDVRIFLR---HLKLTKGC-------SVQHR---------------RLVQ 145
            :.::.||..::.:..:.:.:|..   |.|:.:..       ..||:               .||.
  Fly   330 ERVVLRPKTTVVNFVEKIELFANKKTHYKIMENAFKRFVIERTQHKPMLFNQEEVVRLEDDLLVT 394

  Fly   146 LGIASVE----IFDAPGVADDECFEIAHD-----AELLLADIRLGMPFSLDFIFKYLPHSFERPM 201
            :||....    :.||..:.:.:.:  |.|     .|::..:.....|.|:..:.: || .:::.:
  Fly   395 VGILPEHFRYCVVDAQFLKESKIY--AADLVRPVGEIIKEETPPTSPLSVQDLIQ-LP-EYDKIV 455

  Fly   202 EQLEKLLETS---KISFSHRFPTTALVVGPVDCGKSGLLSEFLRRHS-----CNCFYITASQVLR 258
            :|:.:.|..:   ....|.......|:.|....||:.|:...|.:.|     |:..:...|   |
  Fly   456 DQVVQELRMNLCLSADNSVMRQCNVLLAGASGTGKTVLVERILDQLSRKPDYCHFEFFHGS---R 517

  Fly   259 SYPGETE---EELRRIFQAAQTFKEKLRPLLPIVILIEDLELLCPSTAVADAKNSSNSLRISAEL 320
            |...:||   ::||.||.:....       .|.::::|:|::|..:.....:::.....|::..:
  Fly   518 SKGRKTESIQKDLRNIFTSCLQH-------APAIVVLENLDVLAHAAGEQSSQDGEYYNRMADTV 575

  Fly   321 YKLL--DALPRGIICLATSGVPDSLHEH---ARRRFVREVTINMPS--EGQRRQLVEHLCEVHEL 378
            |:|:  ......|..:||.....:|::.   .|.|.|.:....:|:  ...|..::..||.  .:
  Fly   576 YQLIVQYTTNNAIAVIATVNELQTLNKRLSSPRGRHVFQTVARLPNLERADREIILRELCS--HI 638

  Fly   379 NISQTL-LEHIARNTQGYVIADLTLLLRRV---------QQQLLTKDDF--DIEHIFLKSLSQTQ 431
            |:::.| |...:..|:||...||...:.|.         .|.|||.|..  .:||.....|...|
  Fly   639 NVAKDLDLVKFSNLTEGYRKCDLVQFVERAIFYAYRISKTQPLLTNDQLIESLEHTNSYCLQGIQ 703

  Fly   432 PSASRSTDVRVSKMTAGFEVIGGMEALKRTLQVSVLAGIRQSAAFARFGLSLPKGVLLYGPPGCA 496
            .:.....|...::|..  |.:.|:|::...|:..::...|....|....|....|||||||||..
  Fly   704 SNQRTGNDADANEMRV--EELPGLESVVGVLEEVLMWPSRYPTIFNASPLRNQAGVLLYGPPGTG 766

  Fly   497 KTTVAKCLAKEADMTFIATSAAEVYSPYVGCAERFISRIFDTARKNAPCLIFLDEIDSLVGRRTV 561
            ||.:...||...::..|:....|:.:.|:|.:|..:..:|:.||...||::|.||.|||..:|..
  Fly   767 KTYLVSQLATSWNLRIISVKGPELLAKYIGQSEENVRNLFNRARSARPCVLFFDEFDSLAPKRGH 831

  Fly   562 SSGGGGGQVQLRILSTLLTEMNGIVGGGSQQHILVVAATNRPDMIDDALLRPGRFDKLIHVPAPD 626
            .|.|    |..|:::.||||::|:.|   .|.:.|:|||:||:::|.||||.||.|:|:..|.||
  Fly   832 DSTG----VTDRVVNQLLTELDGVEG---LQGVTVIAATSRPELLDPALLRSGRIDRLVECPLPD 889

  Fly   627 EKSRLALLKLHSQRMPFHENVFLQEIAARTDRYSGADLCNLCNEA-------AIEAFQRDFKATE 684
            ..:|:.:.:..|..:...|.|.....|.:|..|:|||:.::...|       |:..|..:..|.:
  Fly   890 APARVRIFEALSSTLSLDECVDFDWFAGKTANYTGADIQSILTSANMAAVKEALAQFGHEKLAKK 954

  Fly   685 IELQDFEKVLTKQ--KSSLTQSQIDGYYKFAYRF 716
            |.|:....:.:.|  :.||:.|.:..|::...||
  Fly   955 ISLKQKHLIESFQTTRPSLSASDVAKYHRTYARF 988

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12010NP_728878.1 SpoVK 201..707 CDD:223540 144/544 (26%)
AAA 224..357 CDD:278434 31/145 (21%)
AAA 487..623 CDD:278434 55/135 (41%)
Pex1NP_652016.1 PEX-1N 93..168 CDD:286361
SpoVK 479..974 CDD:223540 139/515 (27%)
P-loop_NTPase 480..604 CDD:304359 28/133 (21%)
AAA 757..887 CDD:278434 55/136 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445212
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000137
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23077
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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