DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12010 and CG14183

DIOPT Version :10

Sequence 1:NP_728878.1 Gene:CG12010 / 38421 FlyBaseID:FBgn0035443 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_649172.3 Gene:CG14183 / 40192 FlyBaseID:FBgn0036931 Length:872 Species:Drosophila melanogaster


Alignment Length:623 Identity:114/623 - (18%)
Similarity:199/623 - (31%) Gaps:225/623 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 LLQ-RPPVSLEDLKDDVRIFLRHLKLTKGCSVQHRRLVQLGIASVEIFDAPGVADDECFEIAHDA 171
            ||| |.|..:||:.|.:|.:.:                       |.:||.|             
  Fly   331 LLQFRSPWMMEDISDHIRAWFK-----------------------EFYDATG------------- 359

  Fly   172 ELLLADIRLGMPFSLDFIFKYLPHSFERPMEQLEKLLETSKISFSHRFPTTALVV-----GPVD- 230
                           :|      |.:..|::|                 .|.|||     .|:: 
  Fly   360 ---------------NF------HPYPDPVKQ-----------------GTVLVVIDETMTPMEF 386

  Fly   231 ---CGKSGLLSEFLRRHSCNCFYITASQVLRSYPGETEEELRRIFQAAQTFKEKLRPLLPIVILI 292
               .||..|....|::             ||.  .|.:|:.::        ||||:.|       
  Fly   387 QESLGKKPLSKAELKK-------------LRD--KEKKEKRKK--------KEKLKQL------- 421

  Fly   293 EDLELLCPSTAVADAKNSSNSLRISAELYKLLDALPRGIICLATSGVPDSLHEHARRRFVREVTI 357
                      .:.:||...          ||.||           ||.|..:|....:.:..:..
  Fly   422 ----------KMKEAKRRK----------KLRDA-----------GVIDIGYELTASKAIENIEE 455

  Fly   358 NMPSEGQR-RQLVEHLCEVHELN---ISQTLLEHIARNTQG----YVIADLTLLLRRVQQQLLTK 414
            .|....:. |.:.|:|.:.|:..   :::..|..|.:..:|    |:..:..||     ::.|.|
  Fly   456 TMKKYSKDWRNVDEYLNKNHDPIKEWVTEEQLAKIHQEVRGLVDEYMRVEYELL-----REALAK 515

  Fly   415 D-----------------------------DFDIEHIF--LKSLSQTQPSASRSTDVRVSKMT-- 446
            |                             |..:|.::  ||.....:....|..|..::...  
  Fly   516 DNDEKYKALKVKYPKKKKEKRKKKPKDMTGDRTLESLYNELKDAGIIEEIGHRDFDEFITDFNFV 580

  Fly   447 -------AGFEVIGGMEA-LKRTLQVSVLAGIRQSAAFARFGLSLPKGVLLYGPPGCAKTTVAKC 503
                   .|...:|..:. :|..:|.|:|       ....|.:..||.:||.||....|..:.:.
  Fly   581 ADDTRDEDGLTTLGPAKGDIKMVIQESML-------GMGEFDVPKPKSLLLIGPLNSGKRLLCEI 638

  Fly   504 LAKEADMTFIATSAAEVYSPYVGCAERFISRIFDTARKNAPCLIFLDEIDSLVGRRTVSSGGGGG 568
            :|.|.|..|:..|....|. |....:.|:..|...|:...|.:::::|...|..::....   ..
  Fly   639 IASELDAVFMNLSPENTYK-YAKDLKYFLHVILKVAKAFQPTIMYIEEAHRLFWKKVPPE---AV 699

  Fly   569 QVQLRILST-----LLTEMNGIVGGGSQQHILVVAATNRPDMIDDALLRPGRFDKLIHVPAPD-E 627
            ::..|:|.|     :|..:.      ....|::|..:|.|...:..:.|  .|.|::.:|..| .
  Fly   700 EINPRLLGTSLASKILKPLK------KNDKIVLVGTSNMPWAANGGIKR--AFQKVLLIPKCDYG 756

  Fly   628 KSRLALLKLHSQRMPFHENVFLQEIAART-DRYSGADL 664
            .|.|..|:|.::..|.....:.....||. ..|:..|:
  Fly   757 TSFLLWLELMTENAPDDMKEYAYSALARVLQAYNSGDI 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12010NP_728878.1 CDC48 <220..713 CDD:273521 97/510 (19%)
CG14183NP_649172.3 Adgb_C_mid-like <201..>278 CDD:412094
globin helix H 201..232 CDD:412094
IQCD 247..278 CDD:467745
IQ motif 259..277 CDD:412094
P-loop containing Nucleoside Triphosphate Hydrolases 617..750 CDD:476819 31/144 (22%)
Blue background indicates that the domain is not in the aligned region.

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