Protein Alignment CG12010 and Fign

DIOPT Version :10

• Sequence 1: NP_728878.1
• Gene: CG12010 / 38421
• FlyBaseID: FBgn0035443
• Length: 717
• Species: Drosophila melanogaster
• Sequence 2: NP_001099954.1
• Gene: Fign / 295649
• RGDID: 1308174
• Length: 759
• Species: Rattus norvegicus
• Alignment Length: 403
• Identity: 106/403 - (26%)
• Similarity: 178/403 - (44%)
• Gaps: 75/403 - (18%)

  Fly   359 MPSEGQRR-------------------QLVEHLCEVHELNISQTLLEH-------IARNTQGYVI 397
            ||||.||:                   .|.....|......|..:.||       :|...||..:
  Rat   383 MPSEQQRKFSSQSSRALTPPSYSTAKNSLGSRSSESFGKYTSPVMSEHGDDHRQLLAHPIQGPGL 447

  Fly   398 ADLTLLLRRVQQQLLTKDDFDIEHIFLKSLSQTQPSASRSTDVRVSKMTAGFEVIGGMEALKRTL 462
            ...|.....|.:||...|...|:.:..:.::|..|              ..:..|.|::.:|..:
  Rat   448 RAATSSNHSVDEQLKNTDTHLIDLVTNEIITQGPP--------------VDWSDIAGLDLVKAVI 498

  Fly   463 QVSVLAGIRQSAAFARFGL-SLPKGVLLYGPPGCAKTTVAKCLAKEADMTFIATSAAEVYSPYVG 526
            :..||..:.:|.||:  || :||:.:||:||.|..||.:.:|:|.:...||...:.:.:.:.::|
  Rat   499 KEEVLWPVLRSDAFS--GLTALPRSILLFGPRGTGKTLLGRCIASQLGATFFKIAGSGLVAKWLG 561

  Fly   527 CAERFISRIFDTARKNAPCLIFLDEIDSLVGRRTVSSGGGGGQVQ---LRILSTLLTEMNGIVGG 588
            .||:.|...|..||...|.:||:.:||.|:..:.........:::   |..|.|:||
  Rat   562 EAEKIIHASFLVARCRQPSVIFVSDIDMLLSSQVSEEHSPVSRMRTEFLMQLDTVLT-------- 618

  Fly   589 GSQQHILVVAATNRPDMIDDALLRPGRFDKLIHVPAPDEKSR----LALLKLHSQRMPFHENVFL 649
            .::..|:|:.||::|:.||::|.|  .|.|.:.:|.||..:|    :.||..|:..:...|...|
  Rat   619 SAEDQIVVICATSKPEEIDESLRR--YFMKRLLIPLPDSTARHQIIVQLLSQHNYCLNDKEFALL 681

  Fly   650 QEIAARTDRYSGADLCNLCNEAAIEAFQRDFKATE-----------IELQDFEKVLTKQKSSLTQ 703
            .:   ||:.:||.|:.:||.|||:..... ..||:           |..||||....|.:.|::|
  Rat   682 VQ---RTEGFSGLDVAHLCQEAAVGPLHA-MPATDLSAIMPSQLRPITYQDFENAFCKIQPSISQ 742

  Fly   704 SQIDGYYKFAYRF 716
            .::|.|.::...|
  Rat   743 KELDMYVEWNKMF 755

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12010	NP_728878.1	CDC48	<220..713	CDD:273521	105/398 (26%)
Fign	NP_001099954.1	RecA-like_fidgetin	487..650	CDD:410931	52/174 (30%)
		AAA_lid_3	675..>706	CDD:465537	12/33 (36%)
		Vps4_C	<723..756	CDD:462762	11/33 (33%)