Protein Alignment CG12010 and rix7

DIOPT Version :10

• Sequence 1: NP_728878.1
• Gene: CG12010 / 38421
• FlyBaseID: FBgn0035443
• Length: 717
• Species: Drosophila melanogaster
• Sequence 2: NP_595792.1
• Gene: rix7 / 2539968
• PomBaseID: SPBC16E9.10C
• Length: 779
• Species: Schizosaccharomyces pombe
• Alignment Length: 610
• Identity: 170/610 - (27%)
• Similarity: 290/610 - (47%)
• Gaps: 119/610 - (19%)

  Fly   204 LEKLLETSKISFSH---------RFPTTALVVGPVDCGKSGLLSEFLRRHSCNCFYITASQVLRS 259
            :.:|||...:...|         ..|...|:.||..|||:.|.:............|:|..::..
pombe   183 INELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSG 247

  Fly   260 YPGETEEELRRIFQAAQTFKEKLRPLLPIVILIEDLELLCPSTAVADAKNSSNSLRISAELYKLL 324
            ..||:|:::|.:|:.|::       |.|.::.|::::.:.|....|..:...   ||.|:....:
pombe   248 MSGESEKKVREVFEEAKS-------LAPCLMFIDEIDAVTPKRESAQREMER---RIVAQFLTCM 302

  Fly   325 DALP------RGIICLATSGVPDSLHEHARR--RFVREVTINMPSEGQRRQLVEHLCEVHELNIS 381
            |.|.      :.::.:..:..||||....||  ||.||:.:.:||:..|.:::..:.:  .|.:|
pombe   303 DELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAK--GLKLS 365

  Fly   382 QTL-LEHIARNTQGYVIADLTLL--------LRRVQQQL--LTK--------------------- 414
            ... ...:|:.|.|||.|||..|        ::|:..::  |.|
pombe   366 GDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKRIFNEISPLNKLDLNSDPRFNELDSDMALDSN 430

  Fly   415 DDFDIEHI----------------------------FLKSLSQTQPSASRSTDVRVSKMTAGFEV 451
            |...::|.                            |:::|::.|||:.|.....|..::  :..
pombe   431 DSLPLDHSSIIQRYLNAHPDPLSPEELEPLAICPQDFIEALAKVQPSSKREGFATVPGVS--WNN 493

  Fly   452 IGGMEALKRTLQVSVLAGIRQSAAFARFGLSLPKGVLLYGPPGCAKTTVAKCLAKEADMTFIATS 516
            ||.:::::..||::::..|::...:...|:|.|.||||:|||||.||.:||.:|.|:...||:..
pombe   494 IGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIR 558

  Fly   517 AAEVYSPYVGCAERFISRIFDTARKNAPCLIFLDEIDSLVGRRTVSSGGGGGQVQLRILSTLLTE 581
            ..|:.:.|||.:||.:.::|..||.::||:||.||:|::|.||..|.    .:...|:::|||||
pombe   559 GPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSL----SEASSRVVNTLLTE 619

  Fly   582 MNGIVGGGSQQHILVVAATNRPDMIDDALLRPGRFDKLIHVPAPDEKSRLALLKLHSQRMPFHEN 646
            ::|:   ..:..:.|:|||||||:||.|:|||||.||.:.|..||...|:.:||..:::.|.||.
pombe   620 LDGL---SDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEE 681

  Fly   647 VFLQEIAARTDR---YSGADLCNLCNEAAIEAFQ----RDFKATEIEL-------------QDFE 691
            |.| ::..|.:|   :|||||..|..|||:.|.:    .|..:.|.|:             .|||
pombe   682 VNL-DVLGRDERCSNFSGADLAALVREAAVTALRSAVFADIASNEPEITQHSALEPIRVTNADFE 745

  Fly   692 KVLTKQKSSLTQSQIDGYYKFAYRF 716
            ......|.|::......|.:.|.|:
pombe   746 LAFKNIKPSVSDRDRQKYQRLAKRW 770

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12010	NP_728878.1	CDC48	<220..713	CDD:273521	164/580 (28%)
rix7	NP_595792.1	CDC48	<170..774	CDD:273521	170/610 (28%)