DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12010 and AFG2A

DIOPT Version :10

Sequence 1:NP_728878.1 Gene:CG12010 / 38421 FlyBaseID:FBgn0035443 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001425251.1 Gene:AFG2A / 166378 HGNCID:18119 Length:917 Species:Homo sapiens


Alignment Length:589 Identity:182/589 - (30%)
Similarity:285/589 - (48%) Gaps:79/589 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 DECFEIAHDAELLLADIRLGMPFSLDFIFKYLPHSFERPMEQLEKLLETSKISFSHRFPTTALVV 226
            |..|::.:|           |...|....|.:....|.|::|.|...     |:....|...|:.
Human   345 DNQFKVTYD-----------MIGGLSSQLKAIREIIELPLKQPELFK-----SYGIPAPRGVLLY 393

  Fly   227 GPVDCGKSGLLSEFLRRHSCNCFYITASQVLRSYPGETEEELRRIFQAAQTFKEKLRPLLPIVIL 291
            ||...||:.:..............|...:::..:.||||.:||:|| |..|.:.      |.:|.
Human   394 GPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIF-AEATLRH------PSIIF 451

  Fly   292 IEDLELLCPSTAVADAKNSSNSLRISAELYKLLDAL----PRG-IICLATSGVPDSLHEHARR-- 349
            |::|:.|||..  ..|:|.... |:.|.|..|:|.:    ..| ::.|..:..|.:|....||  
Human   452 IDELDALCPKR--EGAQNEVEK-RVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPG 513

  Fly   350 RFVREVTINMPSEGQRRQLVEHLCEVHELNISQTLLEHIARNTQGYVIADLTLL----------- 403
            ||.:|:.|.:|:...|..:::.|.......:::..|..:|.:..|||.|||.:|           
Human   514 RFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAAGTRILK 578

  Fly   404 ---------------------LRRVQQQLLTKDDFDIEHI-------FLKSLSQTQPSASRSTDV 440
                                 |||:.::.....|..:..:       ||::::..:|||.|  ::
Human   579 AHMYVSAFATGLTQTPQGLCALRRILKKQPNLPDVKVAGLVKITLKDFLQAMNDIRPSAMR--EI 641

  Fly   441 RVSKMTAGFEVIGGMEALKRTLQVSVLAGIRQSAAFARFGLSLPKGVLLYGPPGCAKTTVAKCLA 505
            .:......:..|||:|::|..|:.:|...::...:|.|.|:..||||||||||||:||.:||.||
Human   642 AIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALA 706

  Fly   506 KEADMTFIATSAAEVYSPYVGCAERFISRIFDTARKNAPCLIFLDEIDSLVGRRTVSSGGGGGQV 570
            .|:.:.|:|....|:.:.|||.:||.:...|..||..||.:||.||:|:|...|  .|..|.|.|
Human   707 NESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVER--GSSLGAGNV 769

  Fly   571 QLRILSTLLTEMNGIVGGGSQQHILVVAATNRPDMIDDALLRPGRFDKLIHVPAPDEKSRLALLK 635
            ..|:|:.|||||:||   ...:.:.::|||||||.||.||:||||.|::|:||.||..:|..:.|
Human   770 ADRVLAQLLTEMDGI---EQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFK 831

  Fly   636 LHSQRMPFHENVFLQEIAARTDRYSGADLCNLCNEAAIEAFQRDFKATEIELQDFEKVLTKQKSS 700
            |....||....|.|.|:..:||.||||::..:|.|||:.|.:.|.:|..|..:.|.:.|:.....
Human   832 LQFHSMPVSNEVDLDELILQTDAYSGAEIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPR 896

  Fly   701 LTQS 704
            :.:|
Human   897 IPES 900

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12010NP_728878.1 CDC48 <220..713 CDD:273521 171/531 (32%)
AFG2ANP_001425251.1 None

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