DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ythdc1 and ECT9

DIOPT Version :10

Sequence 1:NP_647811.2 Gene:Ythdc1 / 38420 FlyBaseID:FBgn0027616 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_174117.2 Gene:ECT9 / 839689 AraportID:AT1G27960 Length:539 Species:Arabidopsis thaliana


Alignment Length:483 Identity:107/483 - (22%)
Similarity:178/483 - (36%) Gaps:107/483 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPRAARKQTLPMREMADLDAVHLG---LDEN-----------------EADIAEELQDFEFNTRS 45
            :|...::.:|..|..:.|.  |.|   .|::                 :..::.|...|:.|:|.
plant    86 VPSDFQRSSLSTRNQSSLQ--HYGDLYADDSRYFVPFHLSNQQYPTPEDIHLSPEFHMFQANSRH 148

  Fly    46 EASESNGGDSS--DSEPSISSVSTATSSLAGSSKRKTKKP-AKQSPQPAVETKSSKSSAKNKAKR 107
            .....|..:||  |:.......|....::.|..:.....| :.::..|.:  .|::...::....
plant   149 FDRHVNERNSSEIDNMMRARGNSVLRDNIYGEPRGMNLNPFSGENMFPPL--ASTRPCMRHLGSA 211

  Fly   108 EPTPEELNGGKKKKRTDSGTKKTTSSEASDKVKSKSPDTEDRQPSAKKSRTKIPSNANDSAGHKS 172
            |....:.|.|.    ...|......|.|:...:.::.....|.|.:..|.:  |:..||.     
plant   212 ELLANDFNMGP----AHGGLHDAFESAANLSYREQAYAQCKRSPFSASSSS--PTWENDY----- 265

  Fly   173 DLSEAEDEKPSLPTL-ESDSESSDS--------DSGTQHKRNGGNGGGNGRGKPSSKSSTPEKDS 228
                      :||.| |:.|||.:.        |..|:..|      |....:.:|||.....|.
plant   266 ----------NLPPLDEARSESYNDFSHCPAMLDMLTESNR------GPRASRLNSKSKMISYDR 314

  Fly   229 VGGGTHSHSQKGYDYMTKLNYL--FRDTRFFLIKSNNSDNVQLSKNKSVWATLPQNDANLNQAFK 291
            |            |...:...|  |||.:||:|||.:.|||..|....|||:....:..|:.|::
plant   315 V------------DRFCQQELLSQFRDAKFFVIKSYSEDNVHKSIKHCVWASTKNGNKKLDAAYR 367

  Fly   292 EARN------VLLIFSVNESGKFAGFARMAAPSRRDIPQVAWVLPPSISPKALGGVIELDWICRK 350
            ||:.      |.|:||||.|.:|.|.|.|..|...:.....|      ......|...:.|:..|
plant   368 EAKKKDVACPVFLLFSVNASSQFCGVAEMVGPVDFNTSVEYW------QQDRWSGHFPVQWLIVK 426

  Fly   351 ELSFNATLHLHNTWNEGKPVKIGRDGQEIEPKIGGEL------CRL---------FPEDEQIELT 400
            ::..:...|:....|:.|||...||.||:..:.|.|:      |.:         |.|:.||.:.
plant   427 DVPNSLFRHIIIESNDNKPVTNSRDTQEVGLEKGIEMLDIFISCEMRSSILDDFNFYEERQIAIQ 491

  Fly   401 PILKKSKETARVMREKGIHVIYKPPRSL 428
            .  :|:::.| |:....:.....|..||
plant   492 D--RKARQRA-VLESLALSATSAPTYSL 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ythdc1NP_647811.2 YTH 255..391 CDD:410979 44/156 (28%)
ECT9NP_174117.2 YTH 330..467 CDD:461195 43/142 (30%)

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