Sequence 1: | NP_647811.2 | Gene: | Ythdc1 / 38420 | FlyBaseID: | FBgn0027616 | Length: | 721 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001166599.1 | Gene: | YTHDF2 / 51441 | HGNCID: | 31675 | Length: | 579 | Species: | Homo sapiens |
Alignment Length: | 377 | Identity: | 87/377 - (23%) |
---|---|---|---|
Similarity: | 153/377 - (40%) | Gaps: | 63/377 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 61 SISSVSTATSSLAGSSKRKTK---------KPAKQSPQPAVETKSSKSSAKNKAKREPTPEELNG 116
Fly 117 GKKKKRTDSGT--KKTTSSEASDKVKSKS---PDTEDRQPSAKKSRTKIPSNANDSAGHKSDLSE 176
Fly 177 AEDEKPSLPTLESDSES-----SDSDSGTQHKRNGGNGGGNGRGKPSSKSSTPEKDSV---GGGT 233
Fly 234 HSHSQKGYDYMTKLNYLFRDTRFFLIKSNNSDNVQLSKNKSVWATLPQNDANLNQAFKEARN--- 295
Fly 296 VLLIFSVNESGKFAGFARMAAPSRRDIPQVAWVLPPSISPKALGGVIELDWICRKELSFNATLHL 360
Fly 361 HNTWNEGKPVKIGRDGQEIEPKIGGELCRLFPEDEQIELTPILKKSKETARV 412 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ythdc1 | NP_647811.2 | YTH | 254..392 | CDD:309322 | 38/140 (27%) |
YTHDF2 | NP_001166599.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..45 | ||
Localization to mRNA processing bodies (P-bodies). /evidence=ECO:0000269|PubMed:24284625 | 2..384 | 40/182 (22%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 247..387 | 32/153 (21%) | |||
Interaction with m6A-containing mRNAs. /evidence=ECO:0000269|PubMed:24284625 | 385..579 | 46/193 (24%) | |||
YTH | 411..544 | CDD:398013 | 39/150 (26%) | ||
N6-methyladenosine binding. /evidence=ECO:0000269|PubMed:25412658, ECO:0007744|PDB:4RDN | 416..418 | 1/1 (100%) |