Protein Alignment Ythdc1 and ythdf3

DIOPT Version :9

• Sequence 1: NP_647811.2
• Gene: Ythdc1 / 38420
• FlyBaseID: FBgn0027616
• Length: 721
• Species: Drosophila melanogaster
• Sequence 2: NP_001120433.1
• Gene: ythdf3 / 100145519
• XenbaseID: XB-GENE-5752937
• Length: 572
• Species: Xenopus tropicalis
• Alignment Length: 386
• Identity: 83/386 - (21%)
• Similarity: 146/386 - (37%)
• Gaps: 60/386 - (15%)

  Fly    43 TRSEASESNGGDS--SDSEPSISSVSTATSSLAGSSKRKTKKPAKQSPQPAVETKSSKSSAKNKA 105
            |...|..|.|..|  ::|.|.:||.:...:|.|..:    :||||  |||.::.|::.....:..
 Frog   205 TVGSALSSAGMTSIAANSVPPVSSSAPKPTSWAAIA----RKPAK--PQPKLKPKNNVGIGSSAV 263

  Fly   106 KREPTPEELNGGKKKKRTDSGTKKTTSSEASDKVKSKSPDTEDRQPSAKKSRTKIPSNANDSAGH 170
            ...|....:|.|   ...|.|....|....|  |....|..:..||..:    .:|...|
 Frog   264 PPPPIKHNINIG---TWDDKGAIVKTPPIQS--VLPPQPVIQQPQPLTQ----PLPMVQN----- 314

  Fly   171 KSDLSEAEDEKPSLPTLESDSESSDSDSGTQHKRNGGNGGGNGRGKPSSKSSTPEKDSVGG---- 231
            :....:.:.:.|..|..:...:..:.....:::..|.|.......:..|....|...|..|
 Frog   315 QLPQQQLQQQGPQQPPHQIQQQLQNRWVAPRNRGAGFNQNNVSGNENFSLGVVPVSSSPSGVEVH 379

  Fly   232 -------GTHSHSQKGYDYMTKLNYLFRDTRFFLIKSNNSDNVQLSKNKSVWATLPQNDANLNQA 289
                   ..::::.|.:|:..|      :.|.|:|||.:.|::..|...::|.:....:..|:.|
 Frog   380 PVLEKLKAINNYNPKDFDWSLK------NGRVFIIKSYSEDDIHRSIKYTIWCSTEHGNKRLDAA 438

  Fly   290 FKEARN---VLLIFSVNESGKFAGFARMAAPSRRDIPQVAWVLPPSISPKALGGVIELDWICRKE 351
            ::....   :.|:||||.||.|.|.|.|.:....:.....|      |.....|..::.|:..|:
 Frog   439 YRSLNGKGPLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVW------SQDKWKGKFDVKWVFVKD 497

  Fly   352 LSFNATLHLHNTWNEGKPVKIGRDGQEIEPKIGGELCRLFPEDEQIELTPILKKSKETARV 412
            :..|...|:....|:.|||...||.||:            |.::..::..|:...|.|..:
 Frog   498 VPNNQLRHIRLENNDNKPVTNSRDTQEV------------PLEKAKQVLKIIATFKHTTSI 546

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ythdc1	NP_647811.2	YTH	254..392	CDD:309322	36/140 (26%)
ythdf3	NP_001120433.1	YTH	404..537	CDD:367840	37/150 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2345
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.940