DRSC/TRiP Functional Genomics Resources

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Protein Alignment kst and Sptbn4

DIOPT Version :10

Sequence 1:NP_001097492.2 Gene:kst / 38418 FlyBaseID:FBgn0004167 Length:4337 Species:Drosophila melanogaster
Sequence 2:XP_008757363.1 Gene:Sptbn4 / 308458 RGDID:1304682 Length:2609 Species:Rattus norvegicus


Alignment Length:2747 Identity:737/2747 - (26%)
Similarity:1223/2747 - (44%) Gaps:422/2747 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 PGGYSALQTPTPSNRN--SANMTQRD-------------GIIKFENERIKTLQEERLHIQKKTFT 82
            ||....::.|..||.|  :|.....|             ....||..|||.|.:||..:||||||
  Rat    53 PGEVDNMEGPAASNNNNPAARWESPDRGWDREPPAAANAAASLFECSRIKALADEREAVQKKTFT 117

  Fly    83 KWMNSFLIKAKMEVEDLFTDLADGIKLLKLLEIISSEKLGKPNSGRMRVHKIENVNKSLAFL-HT 146
            ||:||.|.:....:.||:.||.||..|.:|||::|.|:|.:|..||||:|.:|||:|:|.|| ..
  Rat   118 KWVNSHLARVGCHIGDLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRIHSLENVDKALQFLKEQ 182

  Fly   147 KVRLESIGAEDIVDGNPRLILGLIWTIILRFQIQEIEIDVDEENESSEKRSAKDALLLWCQRKTH 211
            :|.||::|:.||||||.||.|||:||||||||||.|:|:.::..|:   ||||||||||||.||.
  Rat   183 RVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRET---RSAKDALLLWCQMKTA 244

  Fly   212 GYPGVNITDFTNSWRSGLGFNALIHSHRPDLFEYSTIVNSKNSNLDNLNHAFDTAANELGIPSLL 276
            |||.|||.:||.|||.||.||||||.|||||.:.|.:..| |:|. ||..||.||...||:..||
  Rat   245 GYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDLSKLTKS-NANY-NLQRAFRTAEQHLGLARLL 307

  Fly   277 DAEDIDSARPDEKSILTYVASYYHTFARMKNEQKSGKRIANIVGQLMDADRKKMQYEGLTTNLLS 341
            |.||::...||||||:|||.|:||.|::||.....||||..::.|:::.|:...:||.|...||:
  Rat   308 DPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDQVLEVDKIIERYEELAAELLA 372

  Fly   342 WIRQKTLELEQRDLPNSLEGIQRELLAFKEYRTIEKPPKYKERSEIEALYFTINTLLKALNQPPY 406
            ||.:....:..:...|||.|:|::|.||..|.|:|||.|::|:..:|.|.|:|.:.|:|.|:..:
  Rat   373 WIHRTVDLISNQKFANSLSGVQQQLQAFTAYCTLEKPVKFQEKGNLEVLLFSIQSKLRAHNRRLF 437

  Fly   407 NPQDGQLVNDIEKAWQILEYAEHHREVALRDELLRQEKLEQLNYKFEKKSVLREGYLKEMIQVLS 471
            .|::|..:.||:|||..||.|||.||.|||.||:||||||.|..:|:.|..:||.:|.|..:::|
  Rat   438 VPREGCGIWDIDKAWGELEKAEHEREAALRAELIRQEKLELLAQRFDHKVAMRESWLNENQRLVS 502

  Fly   472 DPRY---LRQVDATLKKHEAISADILARVERFNDLTAMAEELDRENYHGKERVRRREQEVMAKWR 533
            ...:   |..|:|.:||||||.|||.|..||...:..:|:.|..|.|:...||..:...|:.:|.
  Rat   503 QDNFGYELPAVEAAMKKHEAIEADIAAYEERVQGVAELAQALAAEGYYDARRVAAQRDSVLRQWA 567

  Fly   534 QLLELLENQRLNLSQMSNLMNLLREIASTTEAVRELQQQFASEDVGPHLLGVEELLQAHSLQELQ 598
            .|..|:..:|..|.|...|..:.:|:....:.:.|:|.|..|.:.|.||:..::|||.|.|.|..
  Rat   568 LLTGLVGARRTRLEQNLALQKVFQEMVYMVDWMEEMQTQLLSRECGQHLVEADDLLQKHGLLEGD 632

  Fly   599 VNTYGETLKRFNRQALPY---KSSEHKDAALLAQRLADLEEAYSELLRRSAARRARLEEARNFHH 660
            :....|.::..|..||.:   :..:..|..::..|:..:....|||..::|.|||.||.:|:...
  Rat   633 IAAQSERVEALNAAALRFSQLQGYQPCDPQVICNRVNHVHGCLSELQEQAARRRAELEASRSLWA 697

  Fly   661 FMEDYDNEESWLVDKQRICK----------TGITAKDLRAVLSLQQKHKALEDEIKSRKPKSGQM 715
            .:::.:..|||..||:|:.:          |...|.||.:...|..:||.|:.|:..|:....|.
  Rat   698 LLQELEEAESWARDKERLLEATSGSGGAAGTAGGAHDLSSTARLLAQHKILQGELGGRRALLQQA 762

  Fly   716 STAGKRLI--------GEQHPRSSEIQSRIDSLAEHWQALEALVELRRRQLEDAAEAYQFYTDAN 772
            ...|:.|.        |.:....:.:..|..|....||.||.....|.|:|::|...:||..|.:
  Rat   763 LRRGEELAAAGGSVGPGAEPLHLAGLAERAASARRRWQRLEEAAARRERRLQEARALHQFGADLD 827

  Fly   773 EAESWLNEKIALVNSRDYGNDEPSAQALLQRHRDLQGELNAYSGDILNLNQQADKLIKAGICTLE 837
            ....||.:...|..:.|:|:||.|::.|.::||.|.||:.|:.|.:..|.:|...|..|      
  Rat   828 GLLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGGLRRQLATLGGA------ 886

  Fly   838 LSAAEPELPEVEQEEWVNETRLVPKEVWEDEWVEKLEHKKVTETKMLPHVKSLFPFEGQGMKMDK 902
             |.|.|                                                           
  Rat   887 -SGAGP----------------------------------------------------------- 891

  Fly   903 GEVMLLKSKTNDDWWCVRKDNGVEGFVPANYVREVEPRPVACIVPKAEKVKSLQKVKKTILVRQV 967
                                     .|.|..||.||          ||                 
  Rat   892 -------------------------LVVALQVRVVE----------AE----------------- 904

  Fly   968 VPVKRIKPVSVAPKPLVQRRTSTQSINENADSVEKRQQRINQTYDELQEMAQKRHALLEDSIHLF 1032
                                                     |.:.|:.|:|..|...|.|::.::
  Rat   905 -----------------------------------------QLFAEVTEVAALRRQWLRDALAVY 928

  Fly  1033 GFYRECDDFEKWMKEKERMIKS----DEGEGVDNAKRKFEKFITDLSAASKRVEEIDGAVDTFRR 1093
            ..:.|....|.|:.|||:.:.:    |..:.|:..:.:||....::::...||.:::..|.....
  Rat   929 RMFGEVHACELWIGEKEQWLLAMRVPDSLDDVEVVQHRFESLDQEMNSLMGRVLDVNQTVQELVE 993

  Fly  1094 QGHSQLDKIIARQRQIHQIWQRLNNAKAQREKSLEGASSVELFNRTCDEAKVWMSEKMLQLDTAV 1158
            .||...|::.:.|..::..|.|:.....||::.:.....||.......|.:..:.||...:::|.
  Rat   994 GGHPSSDEVRSCQDHLNSRWNRIVELVEQRKEEMSAVLLVENHVLEVAEVRAQVREKRRAVESAP 1058

  Fly  1159 ITPDLRTVQALQRRHQNLERELAPVEDKVNRVTYLGNSVKNAYPAEKDNVNARQQEVQDMWQQVQ 1223
                 |...|||.|...||..|..:|.:...:......:...:||:...::...:|:...|..:.
  Rat  1059 -----RAGGALQWRLSGLEAALQALEPRQAALLEEAALLAERFPAQATRLHQGAEELGAEWGALA 1118

  Fly  1224 QRGSDLRNRIESEVGQQVFNNSAKVLLAWIDSVKDQLNADES--ARDVETANNLLKKHNDLGDDI 1286
            .........:.:....|.|.......|.|:...::...|.|.  .|.:|.|:.||.:|..|.:::
  Rat  1119 GAAQACGEAVAAAGRLQRFLRDLDTFLDWLVRAQEAAGAVEGPLPRSLEEADGLLARHAALKEEV 1183

  Fly  1287 RAHDTEFVEVIQLGKQL--SDGKPNMAETVAVIERLKAEQDAIHR--G-WAEKQKWLLQCVDLQM 1346
            ...:.::..::...:.|  ||| ..:...:|:.|.|...:...|:  | |.|:::.|:|....|:
  Rat  1184 DQREEDYARIVAASEALLASDG-AELGPGLALDEWLPHLEVGWHKLLGLWEERREALVQAHVYQL 1247

  Fly  1347 FNREADKIDATTKSHEAFLEYNNLGASLDEVEAILKRHLDFEKSLMAQDKILKGFSDNADKLISN 1411
            |.|:..:..|..::.|..|....|..:::.||..:|||.||..::....:.::.....|:.|:..
  Rat  1248 FLRDLCQALAVLRNQEVALSGAELPCTVESVEEAMKRHRDFLTTMELNQQKMQVAVQAAEGLLRQ 1312

  Fly  1412 DHYDSKYIGDRRNQVLGKRKAVKDRAFERKRLLQASKDFHKFAAEADDLKVWLQDKTRIAGDENY 1476
            .:...:...:...::|.|.:..:.||.:..:.|........|..:..:|..|:.:|..:|.|...
  Rat  1313 GNAYGEQAQEAVARLLEKSQENQLRAQQWMQKLLDQLVLQHFLRDCHELDGWIHEKMLMARDGTR 1377

  Fly  1477 RDLSNLPRKLQKHQAFERELRANEGQLRNVTKDGQALVQAGNRVPE----VESRVADLNKRWKDL 1537
            .|...|.::..:||||..||..|:..|..:.::||.|:|   ..||    |..::.::.:.|.:|
  Rat  1378 EDSHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQ---EKPELAASVRKKLGEIRQCWAEL 1439

  Fly  1538 LTLSEDKGRKLEQAASQREHNRSLEDAKKKVDELDSALRSGDVGNDLRSCKDLINKQQILESEIT 1602
            .:.::.|.|:|.:|:...:..:|..:..|::..::|.|:..|.|.||.:....:.|.|.:||::.
  Rat  1440 ESTTQAKARQLFEASKADQLVQSFAELDKRLLHMESQLQDVDPGGDLATVNSQLKKLQSMESQVE 1504

  Fly  1603 IWDQKVAELVSTGDDMAHGGHFNAQN----IEAGTKEL--------QQRFKDLRDPTQRRRAKLE 1655
            .|.::|.||             .||.    :|..:|||        .:|...|.:|.|.||..|.
  Rat  1505 EWCREVGEL-------------QAQTAALPLEQASKELVGERQSAVGERLVRLLEPLQERRRLLL 1556

  Fly  1656 ESLNYHKFVFELDSEFQWINEHLPAAKSNELGQNLHQAQSLHKKHKKLEAEIKGHQPMINKALVA 1720
            .|...|:...:||.|..|:.|.||.|...|.|..|...|...||::.|..||:.|.|.:.:.|..
  Rat  1557 ASKELHQVAHDLDDELAWVQERLPLAMLTERGTGLQAVQQHIKKNQGLRREIQAHGPRLEEVLER 1621

  Fly  1721 GQSLISQQHPEREQVESLCQQLEQAWQDLERHCGERSRKLDMSLKAQQYLFDAGEIESWLGERNN 1785
            ...|.|.:.||.|.|....:||:.||..|......|.:.||.:.:.:||.||..|:|:||||:..
  Rat  1622 AGVLASLRSPEAEAVRRGQEQLQSAWTGLREATERRQQTLDAAFQVEQYYFDVAEVEAWLGEQEL 1686

  Fly  1786 VLRSTEYGRDRDSAAKLLTKHKTIELELDTYSGIVTEMGHSCAAMVAANHPDSKVLAAKQQLIEK 1850
            ::.|.:.|:|..|..:||.||..:|..::.|...:.::...|.|::...||||:.::.:|..:::
  Rat  1687 LMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIAQLSRQCRALLEMGHPDSEQISRRQSQVDR 1751

  Fly  1851 MLKSLHKLASQRQGRLMESLYKHEYFLESDEVEQWIREQEQAASSEDYGQDFEHLQLLQNKFDDL 1915
            :..:|.:|..:|:..|.:..:.::...:.||:|.||.|:|..|.|.:.||||||:.:||.||.:.
  Rat  1752 LYVALKELGEERRVSLEQQYWLYQLSRQVDELEHWIAEKEVVAGSPELGQDFEHVSVLQEKFSEF 1816

  Fly  1916 KHRV-EVGADRVDQCELLAKKLIDSESPYANEVEKRQEQLRTSWENLLQLLNQREQKLHAAGEIH 1979
            .... ..|.:|:.....:..:||:.....|..:.:.::.|..:|..||:|:..|.|.|.|:.|:|
  Rat  1817 ASETGTAGRERLAAVNQMVDELIECGHTAAATMAEWKDGLNEAWAELLELMGTRAQLLAASRELH 1881

  Fly  1980 RFHRDVAEALFRIQDKNAALSQELG--RDLNSALALLRKHEGFENDLVALEAQLQVLVEDSVRLQ 2042
            :|..|..|...:|::|...|.:...  ....||.::.|....||:||..|.:|::.|.|.:.:|:
  Rat  1882 KFFSDARELQGQIEEKRRRLPRLTAPPEPRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLR 1946

  Fly  2043 AKYP-SNASAIAQQQDKVVAAWNDLKERSTARGDRLAASSDLQTFLTDVRDIVSWSSNLRAALQA 2106
            ..|. .:|.|||.::.:|:..|.:|..........:::::|...|.:..||::||...:...:.|
  Rat  1947 TVYAGEHAEAIASREQEVLQGWKELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIAGQIGA 2011

  Fly  2107 EEHVSDAAGATALKIQHDAIYGEIEAREDKFRYLNELSDSMVQTGHYAAADVEEKCAAMLDERQK 2171
            .:...|.:....|...|..:..|:|||..:.....||..|::......|.:::.:...:...:::
  Rat  2012 ADKPRDVSSVEVLMNYHQGLKTELEARVPELTACQELGRSLLLNKSAMADEIQAQLDKLGSRKEE 2076

  Fly  2172 LHAAWNKKKIMLEQKIDLFCFLRDAKQIDNLSSSQQAALSSSDFGQTVEDVQNKIRKHDEFERLI 2236
            :...|::....|:|.:::..|.::|...|...::|:..|.|.:.|.:|::|:..||:|:.|.:..
  Rat  2077 VSEKWDRHWEWLQQMLEVHQFAQEAVVADAWLTAQEPLLQSRELGSSVDEVEQLIRRHEAFRKAA 2141

  Fly  2237 QTQEEKVSLLQE-------------------HGRK--------------LIEQRHYDSANIQTIL 2268
            ...||:.|.|:.                   .|||              |:....||        
  Rat  2142 AAWEERFSSLRRLTTIEKLKAEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPGGYD-------- 2198

  Fly  2269 QGV--LARR------QKVKDLCAVRRYKLEDALLYAKFVRDCAEAKYWINEKQKKLEADAASYAE 2325
            :|:  ||||      .:|:......|.:|:...|..:..|        :.|...|:|..|.:.|.
  Rat  2199 RGLEPLARRASDTLSAEVRTRVGYVRQELKPERLQPRIDR--------LPETSGKVEPAAPTAAA 2255

  Fly  2326 VTNLD--------EKIKKLQKHQ--AFQAEVAANQGRIQEIQDTGVILLSKQHESS----PEIKR 2376
            :...|        |:::...:.|  |.:||....:.|.:..:.|     .:..|::    ||.:.
  Rat  2256 LDTTDTPGTPAVTEQVRPRPERQELADRAEELPRRRRSERQEST-----DQPEEAARRRRPERQE 2315

  Fly  2377 AIE------IVLEAWQGLLAELEQRGRGLEEAQDSLE---FNSQLDKIEAWIRDKEMMVQASDTG 2432
            :.:      :.|..::.:....|:|.|.:|..:.|.:   ...:|.|.:|.:.|....:|..:.|
  Rat  2316 SADHEGPHSLTLGRYEQMERRRERRERRIERQESSEQETPTRGELVKGKATLADIVEQLQEKEAG 2380

  Fly  2433 RDLEHC------------NALMRKLDDVDSDMRVDDQRVK------------------------- 2460
            ..|...            ..|...|:..:...|.|..|.:                         
  Rat  2381 PGLPAAVPSLPQPRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSRS 2445

  Fly  2461 ----------------HINQLADKLINQAQVPADTQSVDKRRKDFNYNWRQL-----QGALNAYR 2504
                            |..|....|:.:       :.:|..||..|.:|..|     :|.|..|:
  Rat  2446 APAQGGSAPAPPPPPTHTVQHEGFLLRK-------RELDANRKSSNRSWVNLYCVLSKGELGFYK 2503

  Fly  2505 ALLGGAN----------EIHVFNRDVDDTADRIAEKSLAMSSTDTGRDLAAVEALIRREEALERD 2559
            ...|.|:          .:|....:|  .:|...:|.:....|..|.:. .::|  :.||.:...
  Rat  2504 DSKGPASGGTHGGEPLLSLHKATSEV--ASDYKKKKHVFKLQTQDGSEF-LLQA--KDEEEMNGW 2563

  Fly  2560 MSAVKQKIDQHETAAEF 2576
            :.||...:.:|...|.:
  Rat  2564 LEAVANSVAEHAEIARW 2580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kstNP_001097492.2 CH_beta_spectrin_rpt1 61..176 CDD:409042 64/115 (56%)
CH_beta_spectrin_rpt2 196..302 CDD:409043 67/105 (64%)
SPEC 450..640 CDD:238103 56/195 (29%)
SPEC 658..832 CDD:238103 52/191 (27%)
SH3 885..935 CDD:214620 2/49 (4%)
SPEC 1030..1236 CDD:238103 40/209 (19%)
SPEC 1134..1341 CDD:238103 43/213 (20%)
SPEC 1343..1551 CDD:238103 49/211 (23%)
SPEC 1449..1658 CDD:238103 58/224 (26%)
SPEC 1555..1764 CDD:238103 65/220 (30%)
SPEC 1765..1975 CDD:238103 63/210 (30%)
SPEC 1873..2080 CDD:238103 61/210 (29%)
SPEC 1979..2185 CDD:238103 47/208 (23%)
SPEC 2188..2402 CDD:238103 54/274 (20%)
SPEC 2407..2618 CDD:238103 39/241 (16%)
SPEC 2514..2725 CDD:238103 13/63 (21%)
SPEC 2726..2934 CDD:238103
SPEC 2935..3145 CDD:238103
SPEC 3042..3251 CDD:238103
SPEC 3149..3357 CDD:238103
SPEC 3359..3567 CDD:238103
SPEC 3465..3680 CDD:238103
PH_beta_spectrin 3801..3904 CDD:269975
Sptbn4XP_008757363.1 CH_SF 73..212 CDD:469584 65/138 (47%)
CH_SPTBN4_rpt2 214..343 CDD:409171 76/133 (57%)
SPEC 361..584 CDD:238103 90/222 (41%)
SPEC 479..693 CDD:238103 66/213 (31%)
SPEC 819..1031 CDD:238103 62/370 (17%)
SPEC 1135..1239 CDD:197544 24/104 (23%)
SPEC 1245..1453 CDD:238103 49/210 (23%)
SPEC 1351..1558 CDD:238103 58/222 (26%)
SPEC 1560..1771 CDD:238103 66/210 (31%)
SPEC 1666..1878 CDD:238103 64/211 (30%)
Spectrin 1878..1977 CDD:395348 28/98 (29%)
SPEC 1987..>2154 CDD:238103 38/166 (23%)
PH_beta_spectrin 2466..2570 CDD:269975 23/115 (20%)
Blue background indicates that the domain is not in the aligned region.

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