DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHGPx and Gpx3

DIOPT Version :9

Sequence 1:NP_728869.1 Gene:PHGPx / 38413 FlyBaseID:FBgn0035438 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_071970.2 Gene:Gpx3 / 64317 RGDID:69224 Length:226 Species:Rattus norvegicus


Alignment Length:176 Identity:63/176 - (35%)
Similarity:94/176 - (53%) Gaps:21/176 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 AASIYEFTVKDTHGND-VSLEKYKGKVVLVVNIASKCGLTKNNYEKLTDLKEKYGERGLVILNFP 142
            :.:|||:......|.: :..::|.||.:|.||:||..||| :.|.:|..|:|:.|..|||||.||
  Rat    37 SGTIYEYGALTIDGEEYIPFKQYAGKYILFVNVASYUGLT-DQYLELNALQEELGPFGLVILGFP 100

  Fly   143 CNQFGSQMPEADGEAM--VCHLRDSKADIG--EVFAKVDVNGDNAAPLYKYLK------AKQTGT 197
            |||||.|.|..:.|.:  :.::|.....:.  ::|.|.||||:.....|.:||      |:..|:
  Rat   101 CNQFGKQEPGENSEILPSLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTAELLGS 165

  Fly   198 LG---------SGIKWNFTKFLVNKEGVPINRYAPTTDPMDIAKDI 234
            .|         ..|:|||.||||..:|:||.|:...|...::..||
  Rat   166 PGRLFWEPMKIHDIRWNFEKFLVGPDGIPIMRWYHRTTVSNVKMDI 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHGPxNP_728869.1 GSH_Peroxidase 81..234 CDD:238207 61/172 (35%)
Gpx3NP_071970.2 GSH_Peroxidase 39..211 CDD:238207 61/172 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1483113at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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