DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHGPx and Gpx6

DIOPT Version :9

Sequence 1:NP_728869.1 Gene:PHGPx / 38413 FlyBaseID:FBgn0035438 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_671694.1 Gene:Gpx6 / 259233 RGDID:628789 Length:221 Species:Rattus norvegicus


Alignment Length:180 Identity:62/180 - (34%)
Similarity:93/180 - (51%) Gaps:21/180 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 AASIYEFTVKDTHGND-VSLEKYKGKVVLVVNIASKCGLTKNNYEKLTDLKEKYGERGLVILNFP 142
            |.::||:......|.: |..::|.||.:|.||:||.||||. .|.:|..|:|:.....:.:|.||
  Rat    37 AGTVYEYGANTLDGGEYVQFQQYAGKHILFVNVASFCGLTA-TYPELNTLQEELRPFNVSVLGFP 100

  Fly   143 CNQFGSQMPEADGEAM--VCHLRDSKADIG--EVFAKVDVNGDNAAPLYKYLKAKQTGT---LGS 200
            |||||.|.|..:.|.:  :.::|.....:.  ::|.|.||||||...::.:||:....|   |||
  Rat   101 CNQFGKQEPGKNSEILLGLKYVRPGGGFVPNFQLFEKGDVNGDNEQKVFSFLKSSCPPTSELLGS 165

  Fly   201 ------------GIKWNFTKFLVNKEGVPINRYAPTTDPMDIAKDIEKLL 238
                        .|:|||.||||..:|.|:.|:...|....:..||.:.|
  Rat   166 PEHLFWDPMKVHDIRWNFEKFLVGPDGAPVMRWFHQTPVRVVQSDIMEYL 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHGPxNP_728869.1 GSH_Peroxidase 81..234 CDD:238207 58/172 (34%)
Gpx6NP_671694.1 GSH_Peroxidase 39..211 CDD:238207 58/172 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1483113at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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