DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PHGPx and gpx-8

DIOPT Version :9

Sequence 1:NP_728869.1 Gene:PHGPx / 38413 FlyBaseID:FBgn0035438 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_492818.1 Gene:gpx-8 / 172983 WormBaseID:WBGene00018850 Length:145 Species:Caenorhabditis elegans


Alignment Length:99 Identity:40/99 - (40%)
Similarity:52/99 - (52%) Gaps:12/99 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 ILNFPCNQFGSQMPEADGEAMVCHLRDSKADIGEVFAKVDVNGDNAAPLYKYLK-------AKQT 195
            ||.|||||  |...|:..|:.:.:....:.   :::.|:||||.|..||||.||       ....
 Worm    33 ILVFPCNQ--SNNEESSWESDLPYFFKYQP---KIYQKIDVNGVNTDPLYKLLKKVNVVTLGDSI 92

  Fly   196 GTLGSGIKWNFTKFLVNKEGVPINRYAPTTDPMD 229
            |.||..|.:|||||.|.|:|..|.|:..||.|.|
 Worm    93 GILGDSICYNFTKFFVGKDGHVIKRFCRTTLPKD 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHGPxNP_728869.1 GSH_Peroxidase 81..234 CDD:238207 40/99 (40%)
gpx-8NP_492818.1 Thioredoxin_like <26..126 CDD:294274 39/97 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0386
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1483113at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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