DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gtpx and gpx8

DIOPT Version :10

Sequence 1:NP_728869.1 Gene:Gtpx / 38413 FlyBaseID:FBgn0035438 Length:238 Species:Drosophila melanogaster
Sequence 2:XP_012811797.1 Gene:gpx8 / 100145599 XenbaseID:XB-GENE-6257701 Length:209 Species:Xenopus tropicalis


Alignment Length:172 Identity:58/172 - (33%)
Similarity:85/172 - (49%) Gaps:25/172 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 GDYKNAASIYEFTVKDTHGNDVSLEKYKGKVVLVVNIASKCGLTKNNYEKLTDLKEKYGERGLVI 138
            ||:      |.:.|.|..|..|:|.||:||..||||:||.|..::.||..|.:|..::|.....:
 Frog    45 GDF------YSYEVTDAKGRTVALSKYRGKASLVVNVASSCPHSETNYRSLQELHREFGPYHFTV 103

  Fly   139 LNFPCNQFGSQMPEADGEAMVCHLRDSKADIG---EVFAKVDVNGDNAAPLYKYL----KAKQTG 196
            |.|||||||...|.::.|....    :|.:.|   .:|:|:.:.|..|.|.||:|    |.|.  
 Frog   104 LAFPCNQFGESEPGSNREIEAL----AKRNYGVTFPMFSKIKILGPEAEPAYKFLVDSTKTKP-- 162

  Fly   197 TLGSGIKWNFTKFLVNKEGVPINRYAPTTDPMDIAKDIEKLL 238
                  :|||.|:|||.||..:..:.|......|..::..|:
 Frog   163 ------RWNFWKYLVNPEGQVVKYWRPDETAEIIRPEVASLV 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GtpxNP_728869.1 GSH_Peroxidase 81..234 CDD:238207 55/159 (35%)
gpx8XP_012811797.1 Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold 46..198 CDD:469754 56/169 (33%)

Return to query results.
Submit another query.