DRSC/TRiP Functional Genomics Resources

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Protein Alignment Strip and FAR11

DIOPT Version :10

Sequence 1:NP_647806.2 Gene:Strip / 38412 FlyBaseID:FBgn0035437 Length:927 Species:Drosophila melanogaster
Sequence 2:NP_014272.3 Gene:FAR11 / 855596 SGDID:S000005071 Length:953 Species:Saccharomyces cerevisiae


Alignment Length:956 Identity:187/956 - (19%)
Similarity:331/956 - (34%) Gaps:322/956 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 DTDTHDA--------DANCDGPDLDFVYAD-VDGYQ------------NEIAEL-YSYTEFSEFQ 98
            |.:|.:|        :|..:..|..|...| :||:.            ||..|: |:.....|||
Yeast   132 DNNTDNAVEFQDDAEEAEEENEDESFANVDELDGFDLNKVSDGKHVPINEKGEVDYNMPVDKEFQ 196

  Fly    99 MNVKAFEDQMELYDLPP-------NWQ------KQDSAS--------------QRGIVMKLVD-Q 135
            .::......:|.....|       :|:      .:|..|              |.....|:.. |
Yeast   197 KSLDQCAASLEERSSAPYALQRAVDWELKMFYSLEDELSEWFCSSDYMHFGQTQTLFKQKITQPQ 261

  Fly   136 LEVSDRSFRMQAARCIL---------------YLAQGCWAEVQSDEEQHQITRDN--VLVLYQLG 183
            |...|.::......|::               |::.||:|...|..|..:|.|.|  :||.:...
Yeast   262 LFFDDENYAASVVECLIEDIPNSLASNLLALSYISMGCFAFTNSKSEHTKIIRRNNLMLVPHIQE 326

  Fly   184 VFASFIDLLNMEIESACSPDIVAVKITNVTLVDSTDIRVILSVLYIITETIRDEKEKGSEDYREL 248
            :..:|     .:|..:|..|...:|...:.|..|:      ::||.|.....:.:.:..|....:
Yeast   327 IVHAF-----KKIAISCRDDNRNLKKQTILLFHSS------TILYFICSICIEGRGENPEAVNVV 380

  Fly   249 ADSFVQEINSPLPDGELLAVKLLGMITRFCS----GAAPQFPMKKVVLLLWKVSLLGLGGMDVLK 309
            .|:|.:             ..||..:|::..    .:.....::.::.||:|:.:|..|...|.|
Yeast   381 IDAFEK-------------TDLLEFLTKYIENWRWNSRLAMRIRNMISLLFKLIVLQFGDSSVYK 432

  Fly   310 NLKNE-YRLKVGLEPITEDTLEVTKCMRASSPPATATDILENQYPKRNFKRSLMKQRFLDEPEQI 373
            ..|:. |.|. ||                             .||.::             ||::
Yeast   433 QTKSSIYNLH-GL-----------------------------TYPSKH-------------PEKL 454

  Fly   374 DMEMGGNEGQNNANNGSGNGGNGEEELSQYYRPYDDPSSSASTTSTANPNNQPSLTQPPAAVPPV 438
            .:.                        ..:|:.:.:..:|          ..|....|.:.:|  
Yeast   455 SIS------------------------PLHYQAFREDITS----------RFPDYNMPSSGLP-- 483

  Fly   439 QITARLPWTPKVRQKDID------QFLDISRNKF---IGYSLIGDHESLA-------GLPQPIHE 487
                          ||:|      |||:|.|.|.   :..:||...:.:|       ..||.:|.
Yeast   484 --------------KDVDKSESLSQFLEIPRPKSKNPLNMALIVPEKHIATPAPSPPSSPQLMHL 534

  Fly   488 G-----FKTLQRHM-----YMS---------LAD-----VQIKKEEDIARNPISTHED------- 521
            |     .|:.|.:|     |.|         |.|     ::.|.:.||. .|.||.|.       
Yeast   535 GEGPRPRKSFQTNMAYPCLYPSDNEGSEDDTLEDRIDLNIERKPDNDIV-IPFSTEEAARILSES 598

  Fly   522 -EIKLTPAEVLYQ------------AILPNLPQYMIAL-------------LKVLLAASPTSKSK 560
             ||||:..::.|:            ..|.|.|....||             :.::.......||.
Yeast   599 LEIKLSTKQLWYERDLFMITERGWKQQLENEPYDYAALNHDANSSKEEKSAICIMQRIDKYYKSC 663

  Fly   561 TESINIMADVLPRKMPLTATQS-------------TKLT--VDIGRHKEIIVKAVSAIILLYLKH 610
            ..|.|.:..||.:.|..:.|.:             ..||  ::|.|.||:.:|:.:.|:...||.
Yeast   664 LSSFNSLVFVLLQTMESSLTNNFHRKSEVSDKNLLNMLTPQLEIVRAKELSLKSAAGILHALLKW 728

  Fly   611 FKINHVYQFEFMSQHLV-------FANCIPLVLKFFNQTITE-----YVNTKNSIPLLDFPSCVI 663
            ||::|:.:||    ||.       :.|....:|..:::...|     ||.|.||.    :..|.:
Yeast   729 FKLSHILKFE----HLAVVIHDSRYINTCASILSKYSEVYPERVFNKYVQTPNSF----WKECSL 785

  Fly   664 GEQPDLSGDSFVYGGEMSDK---SYSWRNVFSCINLLRILNKLIKWKHSRVMMLVVFKSAP---- 721
            ..:......|....||:..:   |:::        |||||.|:...|..|:      |..|    
Yeast   786 SNESYRESYSVDDSGEVDTEIMPSFAY--------LLRILRKVTGNKTQRL------KELPLSIG 836

  Fly   722 -ILKKTLKVRHAMMQLYVLKLLKMQTKYLGRQWRKSNMKTMSAIYAKVRHRLNDDWAFGNDLESR 785
             :.|:..::.:..|...:||:.:..|.:..::|:..:|:.:|.:|...:..|.|:|..|.|:...
Yeast   837 ILFKRYYRLFNLDMYHPILKITRELTPFKNKRWKSEHMELISGVYLYEKLELTDNWVTGKDISGE 901

  Fly   786 PWDFQAEECTLRACVDRFNLRRYPEATQKC--GNNGTAAQNAENAQ 829
            ..|...:|..|||.:..:|.:.|..:.:..  |:..:::|:..|.:
Yeast   902 LSDACGQEIALRALLQFYNFQHYEISMEDLGYGHRNSSSQDLLNKE 947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StripNP_647806.2 N1221 69..347 CDD:429737 62/341 (18%)
DUF3402 482..810 CDD:463384 97/419 (23%)
FAR11NP_014272.3 N1221 219..485 CDD:429737 57/382 (15%)
DUF3402 585..928 CDD:463384 83/364 (23%)

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