DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Strip and Strip1

DIOPT Version :9

Sequence 1:NP_647806.2 Gene:Strip / 38412 FlyBaseID:FBgn0035437 Length:927 Species:Drosophila melanogaster
Sequence 2:NP_705791.2 Gene:Strip1 / 229707 MGIID:2443884 Length:837 Species:Mus musculus


Alignment Length:873 Identity:417/873 - (47%)
Similarity:559/873 - (64%) Gaps:101/873 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 DADANCDGPDLDFVYADVDGYQNEIAELYSYTEFSEFQMNVKAFEDQMELYDLPPNWQKQDSASQ 125
            |::...:.|||:|.|||.|.:..|:||||||||..||.||.|.||:...::.....|.:.|:...
Mouse    58 DSEGYSESPDLEFEYADTDKWAAELAELYSYTEGPEFLMNRKCFEEDFRIHVSDKKWTELDTNQH 122

  Fly   126 RGIVMKLVDQLEVSDRSFRMQAARCILYLAQGCWAEVQSDEEQHQITRDNVLVLYQLGVFASFID 190
            |...|:|:|.|||:.|..|::.||.|||:|||.:.|..|:.|.....|.|:.:|.::|.|.:.::
Mouse   123 RTHAMRLLDGLEVTAREKRLKVARAILYVAQGTFGECSSEAEVQFWMRYNIFLLLEVGTFNALVE 187

  Fly   191 LLNMEIE--SACSPDIVAVKITNVTLVDSTDIRVILSVLYIITETIRDEKEKGSEDYRELADSFV 253
            ||||||:  :|||.   ||:...::|.||||:||:|:::|:|.||:..:.:....::|.:..:|.
Mouse   188 LLNMEIDNSAACSS---AVRKPAISLADSTDLRVLLNIMYLIVETVHQDCDGDKAEWRTMRQTFR 249

  Fly   254 QEINSPLPDGELLAVKLLGMITRFCSGAAPQFPMKKVVLLLWKVSLLGLGGMDVLKNLKNEYRLK 318
            .|:.|||.:.|..|:.|.||:|:||||.||.||||||:|||||..|..|||.:.|:::|.|.|..
Mouse   250 AELGSPLYNNEPFAIMLFGMVTKFCSGHAPHFPMKKVLLLLWKTVLCTLGGFEELQSMKAEKRTL 314

  Fly   319 VGLEPITEDTLEVTKCMRASSPPATATDILENQYPK-RNFKRSLMKQRFLDEPEQIDMEMGGNEG 382
            :||.|:.||:::|.:.|||:||||:|:|::|.|..: |...::|:||..||...:.|.....:..
Mouse   315 LGLPPLPEDSIKVIRNMRAASPPASASDLIEQQQKRGRREHKALIKQDNLDAFNERDPYKADDSR 379

  Fly   383 QNNANNGSGNGGNGEEELSQYYRPYDDPSSSASTTSTANPNNQPSLTQPPAAVPPV-QITA--RL 444
            :....|                   ||.|   |....|.|..:..:..||...|.. ::|.  .|
Mouse   380 EEEEEN-------------------DDDS---SLEGEAFPLERDEVMPPPLQHPQTDRLTCPKGL 422

  Fly   445 PWTPKVRQKDIDQFLDISRNKFIGYSLIGDHESLAGLPQPIHEGFKTLQRHMYMSLADVQIKKEE 509
            ||.||||:|||:.||:.||:|||||:|..|..::.|||:||||..|||::|.|.|:|:||.:.||
Mouse   423 PWAPKVREKDIEMFLESSRSKFIGYTLGSDTNTVVGLPRPIHESIKTLKQHKYTSIAEVQAQMEE 487

  Fly   510 DIARNPISTHEDEIKLTPAEVLYQAILPNLPQYMIALLKVLLAASPTSKSKTESINIMADVLPRK 574
            :..|:|:|..|:|::..|||.|||.:||:||||||||||:||||:||||:||:||||:|||||.:
Mouse   488 EYLRSPLSGGEEEVEQVPAETLYQGLLPSLPQYMIALLKILLAAAPTSKAKTDSINILADVLPEE 552

  Fly   575 MPLTATQSTKLTVDIGRHKEIIVKAVSAIILLYLKHFKINHVYQFEFMSQHLVFANCIPLVLKFF 639
            ||.|..||.||.||:.||||:||||:||::||.|||||:||:||||:|:|||||||||||:||||
Mouse   553 MPTTVLQSMKLGVDVNRHKEVIVKAISAVLLLLLKHFKLNHIYQFEYMAQHLVFANCIPLILKFF 617

  Fly   640 NQTITEYVNTKNSIPLLDFPSCVIGEQPDLSGDSFVYGGEMSDKSYSWRNVFSCINLLRILNKLI 704
            ||.|..|:..||||.:||:|.||:.|.|:|:.:|...|   .:..:.|||:|||||||||||||.
Mouse   618 NQNIMSYITAKNSISVLDYPHCVVNELPELTAESLEAG---DNNQFCWRNLFSCINLLRILNKLT 679

  Fly   705 KWKHSRVMMLVVFKSAPILKKTLKVRHAMMQLYVLKLLKMQTKYLGRQWRKSNMKTMSAIYAKVR 769
            ||||||.|||||||||||||:.|||:.||||||||||||:|||||||||||||||||||||.|||
Mouse   680 KWKHSRTMMLVVFKSAPILKRALKVKQAMMQLYVLKLLKVQTKYLGRQWRKSNMKTMSAIYQKVR 744

  Fly   770 HRLNDDWAFGNDLESRPWDFQAEECTLRACVDRFNLRRYPEATQKCGNNGTAAQNAENAQQSNMM 834
            ||||||||:||||::||||||||||.|||.::|||.|||...                       
Mouse   745 HRLNDDWAYGNDLDARPWDFQAEECALRANIERFNARRYDRT----------------------- 786

  Fly   835 AGNNGCGNNGDANGYGNNGGGGNGGHNQQQQLNDYGVEGGFPSDEILTHSDFAFFGHSGWWDRKV 899
                                     |:....|         |.|..|.    :..|      ::|
Mouse   787 -------------------------HSNPDFL---------PVDNCLQ----SVLG------QRV 807

  Fly   900 ELTDYFKANYAVWLEEEVYNSQTDWDAL 927
            :|.:.|:.||.:|||.||::....|:.|
Mouse   808 DLPEDFQMNYDLWLEREVFSKPISWEEL 835

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StripNP_647806.2 N1221 69..344 CDD:285201 124/276 (45%)
DUF3402 482..826 CDD:288715 229/343 (67%)
Strip1NP_705791.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..67 1/8 (13%)
N1221 66..328 CDD:285201 116/264 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 333..423 27/111 (24%)
DUF3402 460..783 CDD:288715 227/325 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849600
Domainoid 1 1.000 248 1.000 Domainoid score I2133
eggNOG 1 0.900 - - E1_KOG3680
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H35064
Inparanoid 1 1.050 813 1.000 Inparanoid score I476
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46345
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002394
OrthoInspector 1 1.000 - - otm42855
orthoMCL 1 0.900 - - OOG6_103643
Panther 1 1.100 - - O PTHR13239
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2109
SonicParanoid 1 1.000 - - X2094
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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