DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Strip and Strip

DIOPT Version :10

Sequence 1:NP_647806.2 Gene:Strip / 38412 FlyBaseID:FBgn0035437 Length:927 Species:Drosophila melanogaster
Sequence 2:XP_061514265.1 Gene:Strip / 1278053 VectorBaseID:AGAMI1_009828 Length:908 Species:Anopheles gambiae


Alignment Length:919 Identity:537/919 - (58%)
Similarity:655/919 - (71%) Gaps:77/919 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 DTDTHDADANCDGPDLDFVYADVDGYQNEIAELYSYTEFSEFQMNVKAFEDQMELYDLPPNWQKQ 120
            :.:..|.:...:.|||||||||.|.:.|||||||||||.:|||.||||||||||||.|||.|||.
Mosquito    13 ENEMPDGNNALEFPDLDFVYADADSHANEIAELYSYTEQAEFQHNVKAFEDQMELYKLPPMWQKL 77

  Fly   121 DSASQRGIVMKLVDQLEVSDRSFRMQAARCILYLAQGCWAEVQSDEEQHQITRDNVLVLYQLGVF 185
            ..:.|.|:::||:|||::|.:|.||:|||||||||||||.|||||:||....|.||::||..|||
Mosquito    78 SESEQNGVILKLLDQLDMSKKSQRMKAARCILYLAQGCWVEVQSDQEQQMWARKNVMLLYSAGVF 142

  Fly   186 ASFIDLLNMEIESACSPDIVAVKITNVTLVDSTDIRVILSVLYIITETIRDEKEKGSEDYRELAD 250
            .:|::|||:||:::.:.:|...||. |:|.||.|:||||||||||||.:|.|||..:::|.:|..
Mosquito   143 GAFVELLNLEIDNSSTANIAMRKIA-VSLADSIDLRVILSVLYIITEVMRAEKESKNQEYSQLVS 206

  Fly   251 SFVQEINSPLPDGELLAVKLLGMITRFCSGAAPQFPMKKVVLLLWKVSLLGLGGMDVLKNLKNEY 315
            :||.||..|:.| |||:||||||:|.||||.||.||||||:|||||:||:.|||||.||.||::|
Mosquito   207 NFVTEITYPIGD-ELLSVKLLGMVTHFCSGMAPHFPMKKVLLLLWKISLVSLGGMDTLKYLKDKY 270

  Fly   316 RLKVGLEPITEDTLEVTKCMRASSPPATATDILENQYPKRN------------FKRSLMKQRFLD 368
            |...||....|||||::|.|||||||.||....:||..||:            .:.||:||..||
Mosquito   271 RSAAGLSQNREDTLEISKVMRASSPPITAPSNDDNQNAKRSRPSRRVCTNPSQTQESLIKQSSLD 335

  Fly   369 EPEQIDMEMGGNEGQNNANNGSGNGGNGEEELSQYYRPYDDPSSSASTTST----ANP------- 422
            |.||:.:||.....:|            ||:||.|:|.|:||.:.|...:.    |||       
Mosquito   336 EQEQLGLEMETAAPEN------------EEDLSDYFRQYEDPINGAGNPAAGEDGANPAAADGAA 388

  Fly   423 ----NNQPSLTQPPAA----VPPVQITARLPWTPKVRQKDIDQFLDISRNKFIGYSLIGDHESLA 479
                ..:...:.||.|    .||.:||.||||.||:|:||||.||:.||:|||||:|..||:::|
Mosquito   389 ENGETKEGECSSPPPAEPVEEPPQEITNRLPWAPKIRRKDIDIFLNNSRSKFIGYTLKDDHDTIA 453

  Fly   480 GLPQPIHEGFKTLQRHMYMSLADVQIKKEEDIARNPISTHEDEIKLTPAEVLYQAILPNLPQYMI 544
            ||||||.|||:||.:|||:|||||||::||:|.|||:||.|.||.|||.|:||||:||||.||||
Mosquito   454 GLPQPIQEGFRTLTKHMYVSLADVQIRREEEINRNPLSTSEGEIPLTPTEILYQALLPNLSQYMI 518

  Fly   545 ALLKVLLAASPTSKSKTESINIMADVLPRKMPLTATQSTKLTVDIGRHKEIIVKAVSAIILLYLK 609
            :|||:||||:||||:|||||||||||||..||:|..||:||.:|:.|||||.|||||||:|||||
Mosquito   519 SLLKILLAAAPTSKAKTESINIMADVLPEDMPMTVLQSSKLGIDVSRHKEITVKAVSAILLLYLK 583

  Fly   610 HFKINHVYQFEFMSQHLVFANCIPLVLKFFNQTITEYVNTKNSIPLLDFPSCVIGEQPDLSGDSF 674
            ||||||:|||||:|||||||||||||||||||.|..||...|.||::|||||||||||:|:.:|.
Mosquito   584 HFKINHIYQFEFISQHLVFANCIPLVLKFFNQDIMSYVGANNGIPIIDFPSCVIGEQPELTSESM 648

  Fly   675 VYGGEMSDKSYSWRNVFSCINLLRILNKLIKWKHSRVMMLVVFKSAPILKKTLKVRHAMMQLYVL 739
            :.|   ...:|||||||||||||||||||.||||||:|||||||||||||:|||||||:||||||
Mosquito   649 LVG---DAATYSWRNVFSCINLLRILNKLTKWKHSRIMMLVVFKSAPILKRTLKVRHALMQLYVL 710

  Fly   740 KLLKMQTKYLGRQWRKSNMKTMSAIYAKVRHRLNDDWAFGNDLESRPWDFQAEECTLRACVDRFN 804
            |||||||||||||||||||||:|||||||||||||||||||||::|||||||:||.|::.|||||
Mosquito   711 KLLKMQTKYLGRQWRKSNMKTISAIYAKVRHRLNDDWAFGNDLDARPWDFQADECALKSGVDRFN 775

  Fly   805 LRRYPEATQKCGNNGTAAQNAENAQQSNMMAGNNGCGNNGDANGYGNN-GGGG------NGGHNQ 862
            .|||.:.     |||..| ..|.....:.:.|..|.|..|...|.|.. ||||      |||...
Mosquito   776 NRRYLQV-----NNGILA-GIEGLDYDDPIEGIGGIGGGGGGLGVGAGLGGGGVGGDGLNGGGAA 834

  Fly   863 QQQLND---------YGVEGGFPSDEILTHSDFAFFGHSGWWDRKVELTDYFKANYAVWLEEEVY 918
            ...:|.         .||.||       :....|.:|.......::||::.||.||.:||::|||
Mosquito   835 LSCVNGGGAGGPGGAGGVGGG-------SERGNACYGGLARKPEEIELSEEFKQNYELWLQQEVY 892

  Fly   919 NSQTDWDAL 927
            |:..|||||
Mosquito   893 NNNIDWDAL 901

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StripNP_647806.2 N1221 69..347 CDD:429737 176/277 (64%)
DUF3402 482..810 CDD:463384 256/327 (78%)
StripXP_061514265.1 None

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