DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12016 and udk

DIOPT Version :10

Sequence 1:NP_647805.1 Gene:CG12016 / 38411 FlyBaseID:FBgn0035436 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_416570.2 Gene:udk / 946597 ECOCYCID:EG11701 Length:213 Species:Escherichia coli


Alignment Length:284 Identity:50/284 - (17%)
Similarity:94/284 - (33%) Gaps:93/284 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QWLVIGISGVTCGGKTTLAHSLHDYFKGLRGAPLWNSPYTIGE--VRLISQDDYFLPVEDKRHQR 65
            |.::|||:|.:..||:.:|.:|   ::.||        ..:|:  :.:|.:|.|:   :|:.|..
E. coli     7 QCVIIGIAGASASGKSLIASTL---YRELR--------EQVGDEHIGVIPEDCYY---KDQSHLS 57

  Fly    66 NEALNAINFELITSLDMAKMLNDIAHIIKGRHVAPEPQEHLVTYANFEHYAQQFQQQYQYNANYY 130
            .|.....|::..:::|.:.:|..:..:.:|..:      .|..|:..||                
E. coli    58 MEERVKTNYDHPSAMDHSLLLEHLQALKRGSAI------DLPVYSYVEH---------------- 100

  Fly   131 KQANGGVYQYPPQQHPRHHPHHQQHHHQHHQIQQQQQHIMSINAQIAAQLRDKKVNFLLVEGFMI 195
                                                     ...:....:..|||  :::||.::
E. coli   101 -----------------------------------------TRMKETVTVEPKKV--IILEGILL 122

  Fly   196 FNQPELLALCNIKYHFHLPYEKCFERRSKRTYDP-----PDVTGYFELCVWPHYEKNFSEYRDCK 255
            .....|....|.......|.:.|..||.||..:.     ..|...::..|.|.:.:.....:...
E. coli   123 LTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYA 187

  Fly   256 DITFLNG-------EIAKEKILAF 272
            ||....|       :|.|.||..|
E. coli   188 DIIVPRGGKNRIAIDILKAKISQF 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12016NP_647805.1 NRK1 6..255 CDD:238982 41/255 (16%)
udkNP_416570.2 PRK05480 3..213 CDD:235492 50/284 (18%)

Return to query results.
Submit another query.