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Protein Alignment CG12016 and Nmrk2

DIOPT Version :9

Sequence 1:	NP_647805.1	Gene:	CG12016 / 38411	FlyBaseID:	FBgn0035436	Length:	323	Species:	Drosophila melanogaster
Sequence 2:	NP_081396.1	Gene:	Nmrk2 / 69564	MGIID:	1916814	Length:	195	Species:	Mus musculus

Alignment Length:	277	Identity:	71/277 - (25%)
Similarity:	108/277 - (38%)	Gaps:	96/277 - (34%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 LVIGISGVTCGGKTTLAHSLHDYFKGLRGAPLWNSPYTIGEVRLISQDDYFLPVEDKRHQRNEAL 69
            |:|||.|||.||||||.:||      |:..|         ...:|.|||:|.|      |...|:
Mouse     3 LIIGIGGVTNGGKTTLTNSL------LKALP---------NCCVIHQDDFFKP------QDQIAV 46

  Fly    70 NAINF---ELITSLDMAKMLNDIAHIIKGRHVAPEPQEHLVTYANFEHYAQQFQQQYQYNANYYK 131
            ....|   :::.||||..||:.:...:|..|                               .:.
Mouse    47 GEDGFKQWDVLESLDMETMLSTVQAWVKDPH-------------------------------KFA 80

  Fly   132 QANGGVYQYPPQQHPRHHPHHQQHHHQHHQIQQQQQHIMSINAQIAAQLRDKKVNFLLVEGFMIF 196
            :|:|                                        ::.|......:.||:|||:::
Mouse    81 RAHG----------------------------------------VSLQSGASDTHVLLLEGFLLY 105

  Fly   197 NQPELLALCNIKYHFHLPYEKCFERRSKRTYDPPDVTGYFELCVWPHYEKNFSEY-RDCKDITFL 260
            :...|:.|.:.:|...:|||:|..||..|||..||..|.|:..|||.|:|...|. :|..::.:|
Mouse   106 SYRPLVDLYSQRYFLTVPYEECKRRRRSRTYMVPDPPGLFDGHVWPMYQKYRREMEQDGVEVVYL 170

  Fly   261 NGEIAKEKILAFVLHRI 277
            :|..:.|.:...||..|
Mouse   171 DGMKSPEGLFHQVLEDI 187

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.