DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12016 and nmrk1

DIOPT Version :10

Sequence 1:NP_647805.1 Gene:CG12016 / 38411 FlyBaseID:FBgn0035436 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001013467.1 Gene:nmrk1 / 541321 ZFINID:ZDB-GENE-050320-8 Length:199 Species:Danio rerio


Alignment Length:275 Identity:74/275 - (26%)
Similarity:109/275 - (39%) Gaps:98/275 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVIGISGVTCGGKTTLAHSLHDYFKGLRGAPLWNSPYTIGEVRLISQDDYF-----LPVEDKRHQ 64
            :::||.|:|.||||||:.||.:.        |.||       .:||||::|     :|.:.:..:
Zfish     4 VIVGIGGMTNGGKTTLSKSLQEL--------LPNS-------CVISQDNFFKDDSEVPADIRGFK 53

  Fly    65 RNEALNAINFELITSLDMAKMLNDIAHIIKGRHVAPEPQEHLVTYANFEHYAQQFQQQYQYNANY 129
            ..:.|:|        |.|.:|:.||                                        
Zfish    54 EYDTLDA--------LHMDRMMGDI---------------------------------------- 70

  Fly   130 YKQANGGVYQYPPQQHPRHHPHHQQHHHQHHQIQQQQQHIMSINAQIAAQLRDKKVNFLLVEGFM 194
                  |.:|..|                       ...::|.:..:.....:..|..|:||||:
Zfish    71 ------GSWQEDP-----------------------VGFMISHSCPVKPTASEPSVFVLIVEGFL 106

  Fly   195 IFNQPELLALCNIKYHFHLPYEKCFERRSKRTYDPPDVTGYFELCVWPHYEKNFSEYRD-CKDIT 258
            |||...|.||.:.||...:|||.|.||||.|.|.|||..||.:..|||.|.||.....: ..||.
Zfish   107 IFNHRPLNALFDKKYFLQIPYETCKERRSSRVYVPPDPPGYLDSYVWPMYLKNRKAMEETVDDIV 171

  Fly   259 FLNGEIAKEKILAFV 273
            ||:|.:.:|.:::.|
Zfish   172 FLDGTLKRETLISTV 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12016NP_647805.1 NRK1 6..255 CDD:238982 67/254 (26%)
nmrk1NP_001013467.1 NRK1 5..165 CDD:238982 67/251 (27%)

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