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Protein Alignment CG12016 and Nmrk1

DIOPT Version :9

Sequence 1:	NP_647805.1	Gene:	CG12016 / 38411	FlyBaseID:	FBgn0035436	Length:	323	Species:	Drosophila melanogaster
Sequence 2:	NP_663472.1	Gene:	Nmrk1 / 225994	MGIID:	2147434	Length:	195	Species:	Mus musculus

Alignment Length:	271	Identity:	70/271 - (25%)
Similarity:	104/271 - (38%)	Gaps:	97/271 - (35%)

- Green bases have known domain annotations that are detailed below.

  Fly     6 VIGISGVTCGGKTTLAHSLHDYFKGLRGAPLWNSPYTIGEVRLISQDDYFLPVEDKRHQRNEALN 70
            ||||.|||.|||||||.||..:               :....:|||||:|.|..:.....|   .
Mouse     5 VIGIGGVTNGGKTTLAKSLQKH---------------LPNCSVISQDDFFKPESEIDIDEN---G 51

  Fly    71 AINFELITSLDMAKMLNDIAHIIK--GRHVAPEPQEHLVTYANFEHYAQQFQQQYQYNANYYKQA 133
            .:.::::.:|:|.||::.::..::  |....|...|                           .|
Mouse    52 FLQYDVLEALNMEKMMSAVSCWMENPGSSAGPAALE---------------------------SA 89

  Fly   134 NGGVYQYPPQQHPRHHPHHQQHHHQHHQIQQQQQHIMSINAQIAAQLRDKKVNFLLVEGFMIFNQ 198
            .|                                                 |..|::|||::||.
Mouse    90 QG-------------------------------------------------VPILIIEGFLLFNY 105

  Fly   199 PELLALCNIKYHFHLPYEKCFERRSKRTYDPPDVTGYFELCVWPHYEKNFSEYRDCK-DITFLNG 262
            ..|..:.|..|...:|||:|..|||.|.|:|||..|||:..|||.|.|:..|..... ||.:|:|
Mouse   106 KPLDTIWNRSYFLTVPYEECKRRRSTRVYEPPDPPGYFDGHVWPMYLKHRQEMSSITWDIVYLDG 170

  Fly   263 EIAKEKILAFV 273
            ..::|.:.:.|
Mouse   171 TRSEEDLFSQV 181

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.