DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12016 and Mbip

DIOPT Version :9

Sequence 1:NP_647805.1 Gene:CG12016 / 38411 FlyBaseID:FBgn0035436 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_663417.1 Gene:Mbip / 217588 MGIID:1918320 Length:341 Species:Mus musculus


Alignment Length:109 Identity:19/109 - (17%)
Similarity:33/109 - (30%) Gaps:32/109 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 VYQYPPQQHPR------HHPHHQQHHHQHHQIQQQQQHIMS---------INAQIAAQLRDKKVN 186
            |..|.||..|.      |.|........:..::::.|:|.:         :...|..:::..:..
Mouse   215 VNTYGPQTRPEGIAGSGHKPTGMLRDCGNQAVEERLQNIEAHLRLQTGGPVPRDIYQRIKKLEDK 279

  Fly   187 FLLVEGFMIFNQPELLALCNIKYHFHLPYEKCFERRSKRTYDPP 230
            .|.:||.    .||.....|..             ..:|...||
Mouse   280 ILELEGI----SPEYFQSVNFS-------------GKRRKVQPP 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12016NP_647805.1 NRK1 6..255 CDD:238982 19/109 (17%)
MbipNP_663417.1 Interaction with MAP3K12 170..341 19/109 (17%)
Leucine-zipper 1. /evidence=ECO:0000255 269..283 2/13 (15%)
Leucine-zipper 2. /evidence=ECO:0000255 312..327
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848166
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.