DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12016 and nmrk-1

DIOPT Version :10

Sequence 1:NP_647805.1 Gene:CG12016 / 38411 FlyBaseID:FBgn0035436 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_491763.1 Gene:nmrk-1 / 188966 WormBaseID:WBGene00020842 Length:340 Species:Caenorhabditis elegans


Alignment Length:268 Identity:57/268 - (21%)
Similarity:92/268 - (34%) Gaps:102/268 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VIGISGVTCGGKTTLAHSLHDYFKGLRGAPLWNSPYTIGEVRLISQDDYFLPVEDKRHQRNEALN 70
            |:.::|.|..||:|||.....:|    ||         ||..:|:||:::               
 Worm     8 VLALAGCTNSGKSTLAKEFQRFF----GA---------GETTIINQDEFY--------------- 44

  Fly    71 AINFELITSLDMAKMLNDIAHIIKGRHVAPEPQEHLVTYANFEHYAQQFQQQYQYNANYYKQANG 135
                         |..|::..|..     |: .|||..    |.|...|.::...|         
 Worm    45 -------------KTENEVEKIYH-----PD-AEHLTD----EGYYWSFDEKEAIN--------- 77

  Fly   136 GVYQYPPQQHPRHHPHHQQHHHQHHQIQQQQQHIMSINAQIAAQLRDKKVNFLLVEGFMIFNQPE 200
                                      |.|.:|.|::         ..|....::::|.||....|
 Worm    78 --------------------------IDQFRQRILN---------ESKVYKNVIIDGNMITEMDE 107

  Fly   201 LLALCNIKYHFHLPYEKCFERRSKRT-YDPPDVTGYFELCVWP----HYEKNFSEYRDCKDITFL 260
            ::.||:......|.::.|..||..|| |.|.|..|||....:|    |.|:.....|....:||:
 Worm   108 IVDLCDRIVVMTLDFKTCKRRREARTDYVPADTPGYFVNVAFPAYVRHLERARQRSRTDSRLTFI 172

  Fly   261 NGEIAKEK 268
              ::::.|
 Worm   173 --DVSESK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12016NP_647805.1 NRK1 6..255 CDD:238982 54/253 (21%)
nmrk-1NP_491763.1 NRK1 8..163 CDD:238982 53/249 (21%)
MoaE 205..332 CDD:238385
Blue background indicates that the domain is not in the aligned region.

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