DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12016 and bar-1

DIOPT Version :9

Sequence 1:NP_647805.1 Gene:CG12016 / 38411 FlyBaseID:FBgn0035436 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_509206.1 Gene:bar-1 / 180982 WormBaseID:WBGene00000238 Length:811 Species:Caenorhabditis elegans


Alignment Length:91 Identity:18/91 - (19%)
Similarity:31/91 - (34%) Gaps:29/91 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 HHQQHHHQHHQIQQQQQHIMSI--NAQIAAQLRDKKVNFLLVEGFMIFNQPELLALCN--IKYHF 211
            ::..||.|...:..:...::.:  |.|:.:|                 ..|||.:|.|  :|   
 Worm   616 YNLMHHEQMANVLDRDDVLVKMLQNVQMQSQ-----------------THPELASLANNILK--- 660

  Fly   212 HLPYEKCFERRSKRTYDPPDVTGYFE 237
                 ..:|:|.|.....|....|.|
 Worm   661 -----MMYEKREKTRNTLPRYNSYLE 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12016NP_647805.1 NRK1 6..255 CDD:238982 18/91 (20%)
bar-1NP_509206.1 armadillo repeat 120..145 CDD:293788
armadillo repeat 155..195 CDD:293788
armadillo repeat 201..240 CDD:293788
armadillo repeat 294..331 CDD:293788
ARM 296..408 CDD:237987
armadillo repeat 337..368 CDD:293788
Extensin_2 739..796 CDD:252669
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0572
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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