DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12016 and arm

DIOPT Version :10

Sequence 1:NP_647805.1 Gene:CG12016 / 38411 FlyBaseID:FBgn0035436 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_061499234.1 Gene:arm / 1270538 VectorBaseID:AGAMI1_013287 Length:850 Species:Anopheles gambiae


Alignment Length:226 Identity:41/226 - (18%)
Similarity:75/226 - (33%) Gaps:67/226 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 YQYPPQQHPRHHPHHQQ-----HHHQHHQIQQQQQHI--MSINAQIAAQ----------LRDKKV 185
            ||.|..:...|:|::..     ...:...:.||..::  ..|::....|          :.|..:
Mosquito     3 YQMPQNRSMSHNPYNSSDMPMPSAKEQTLMWQQNSYLGDSGIHSGAVTQVPSLSGKDDDMEDDPL 67

  Fly   186 NFLLVEGF-MIFNQPELLALCNIKYHFHLPYEKCFERRSKRT-------------------YDPP 230
            .|.:.:|| ..|.|.::..:          .::..:.||:|.                   :||.
Mosquito    68 MFDMDQGFSQNFTQDQVDDM----------NQQLSQTRSQRVRAAMFPETLEEGIEIPSTQFDPQ 122

  Fly   231 DVTGYFELC----VWPHYEKNFSEYRDCKD---------ITFLNGEIAKEKILAFVLHRIVHYFK 282
            ..|....|.    :..|...|...|:|..|         |..||.|   ::::......:||...
Mosquito   123 QPTAVQRLAEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLNDE---DQVVVSQAAMMVHQLS 184

  Fly   283 ERCEVPAPAPVVCPPQQKRFGMLYMGPSNNN 313
            :: |....| ::..||.  ...|....||:|
Mosquito   185 KK-EASRHA-IMNSPQM--VAALVRALSNSN 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12016NP_647805.1 NRK1 6..255 CDD:238982 26/157 (17%)
armXP_061499234.1 None

Return to query results.
Submit another query.