DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PIG-C and GPI2

DIOPT Version :10

Sequence 1:NP_001350858.1 Gene:PIG-C / 38410 FlyBaseID:FBgn0035435 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_015249.1 Gene:GPI2 / 856029 SGDID:S000005997 Length:280 Species:Saccharomyces cerevisiae


Alignment Length:309 Identity:67/309 - (21%)
Similarity:119/309 - (38%) Gaps:85/309 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RQPWVKNLYSNREYPDNYTDASFL-------------------KDLRTNLHCRIYTFGEAIAGIT 54
            |.||.:.|:..:||||||||.||:                   :..|..:.....:|.:     |
Yeast     3 RSPWKRLLWLKQEYPDNYTDPSFIELRARQKAESNQKSDRKLSEAARAQIRLDFISFYQ-----T 62

  Fly    55 VLNNQISCITGFLILYQLMLSDSVSPTTILVPSCGITGIGYLCYRGR--SLSWALLGEDSKTLVT 117
            :||.....||...|.|...  |.:.||..|      :.|..:..|.:  .|..:.:...|..::|
Yeast    63 ILNTSFIYITFTYIYYYGF--DPIPPTIFL------SFITLIISRTKVDPLLSSFMDVKSSLIIT 119

  Fly   118 VVLFGYLFSPMLHTLTQAISTDTIYTMTFFVLLGNLIFGHYGLDVAMVSKA------VSLNAAIF 176
            ..:.  ..||:|.:|::..::|:|:|::|::.|       :.:.|...:|:      :|.|..:.
Yeast   120 FAML--TLSPVLKSLSKTTASDSIWTLSFWLTL-------WYIFVISSTKSKDKPSNLSTNILVA 175

  Fly   177 GAICLASRLPTSYHAFVLLVEAAVFFVLYPIMTEANWHAGFMLPIFAICCMALYCISRPVLYLYA 241
            ....|:|||.|:...|..|:......::.|.....   ...::||          ||..::|.:.
Yeast   176 LVAVLSSRLSTTIDVFCFLLICIQLNIILPTYLSV---TNKVVPI----------ISNIIVYSFL 227

  Fly   242 S-------------TTIFINFVCPFIFVWQQQYKFNIH-------GPWD 270
            :             .::|...|.|..|::   :|.|.|       ..||
Yeast   228 NVALGWIYMLLIFFASVFYITVLPKWFIY---WKINYHKRDNDLLSTWD 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-CNP_001350858.1 GPI2 12..270 CDD:428940 63/304 (21%)
GPI2NP_015249.1 GPI2 6..273 CDD:428940 63/304 (21%)

Return to query results.
Submit another query.