DRSC/TRiP Functional Genomics Resources

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Protein Alignment PIG-C and SETH1

DIOPT Version :10

Sequence 1:NP_001350858.1 Gene:PIG-C / 38410 FlyBaseID:FBgn0035435 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_181043.1 Gene:SETH1 / 818062 AraportID:AT2G34980 Length:303 Species:Arabidopsis thaliana


Alignment Length:297 Identity:81/297 - (27%)
Similarity:145/297 - (48%) Gaps:52/297 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 WVKNLYSNRE--YPDNYTDASFLKDL-------RTNLHCRIYTFGEAIAGITVLNNQIS-----C 62
            |.|..|...:  |.|||||.|||:::       |.:|             :.|:.:.:|     |
plant    15 WRKVAYGGMQIGYDDNYTDESFLEEMVMNANVVRRDL-------------LKVMKDSVSISQYLC 66

  Fly    63 ITGFLILYQL-MLSDSVSPTTILVPSCGITGIGYLCY---RGRSLSWALLGEDSKTLVTVVLFG- 122
            |...::|..: .|..|:...::|:....:...|:|..   ..:.||.:||   .:.||.:..|. 
plant    67 IVALVVLVWVHTLESSLDENSLLLLDLSLLASGFLILLLTEEKMLSLSLL---LRYLVNISFFTT 128

  Fly   123 --YLFSPMLHTLTQAISTDTIYTMTFFVLLGNLIFGHY---------GLDVAMVSKAVSLNAAIF 176
              |:.:|:..|||::||:|:|:.:|..:||.:|....|         .|....::..:|:||:|.
plant   129 GLYILAPIYQTLTRSISSDSIWAVTVSLLLLHLFLHDYSGSTIRAPGALKTPNLTSCISVNASIV 193

  Fly   177 GAICLASRLPTSYHAFVLLVEAAVFFVLYPIMT----EANW--HAGFMLPIFAICCMALYCISRP 235
            .::.:|||||:..|.|.:::.:...|:..|::|    :.|:  |..|...:..:...::|.:.|.
plant   194 ASVFVASRLPSRLHVFAVMLFSLQVFLFAPLVTYCIKKFNFGLHLLFSFALMGLTLYSIYALHRL 258

  Fly   236 VLYLYASTTIFINFVCPFIFVWQQQYKFNIHGPWDEA 272
            ...::.|..:.:|.|||:..:..|:|||.|:||||||
plant   259 FFLVFLSLVLLVNVVCPYWLIRMQEYKFEINGPWDEA 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-CNP_001350858.1 GPI2 12..270 CDD:428940 77/293 (26%)
SETH1NP_181043.1 GPI2 15..293 CDD:428940 77/293 (26%)

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