DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14968 and gulp1b

DIOPT Version :9

Sequence 1:NP_647800.1 Gene:CG14968 / 38406 FlyBaseID:FBgn0035431 Length:199 Species:Drosophila melanogaster
Sequence 2:XP_021332702.1 Gene:gulp1b / 100006392 ZFINID:ZDB-GENE-120228-2 Length:404 Species:Danio rerio


Alignment Length:143 Identity:33/143 - (23%)
Similarity:64/143 - (44%) Gaps:11/143 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ITFKVKYIG-SEV--ARGLWGIKYTRRPVDIMVGVAKNLPPNKVLPNCELKVSTDGVQLEIISPK 83
            :.:..|::| :||  .:|...::...|.:.....:.|:  .....|..||::|..||  :|:.||
Zfish    62 VVYNAKFLGITEVDQPKGTDMVRVAVRKLKFQRHIKKS--EGHKTPKVELQISIYGV--KILDPK 122

  Fly    84 ASINHWSYPIDTISYGVQDLVYTRVFAMIVVKDESSPHPFEVHAFVCDSRAMARKLTFALAAAFQ 148
            ......:..:..:|:...|....|:|..|..:.|:..|    ..:|.||...|.::|.|:..||.
Zfish   123 TKEMLHNCQLHRMSFCADDKTDKRIFTFICTEPETKKH----LCYVFDSEKCAEEITLAIGQAFD 183

  Fly   149 DYSRRVKEATGEE 161
            ...::..|:.|::
Zfish   184 LAYKKFLESGGKD 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14968NP_647800.1 PTB_LDLRAP_insect-like 23..147 CDD:269982 29/126 (23%)
gulp1bXP_021332702.1 PTB_CED-6 51..194 CDD:269971 32/139 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3536
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.