Protein Alignment CG12078 and TIM50

DIOPT Version :10

• Sequence 1: NP_647795.2
• Gene: CG12078 / 38401
• FlyBaseID: FBgn0035426
• Length: 253
• Species: Drosophila melanogaster
• Sequence 2: NP_175986.2
• Gene: TIM50 / 842040
• AraportID: AT1G55900
• Length: 376
• Species: Arabidopsis thaliana
• Alignment Length: 174
• Identity: 47/174 - (27%)
• Similarity: 86/174 - (49%)
• Gaps: 27/174 - (15%)

  Fly    72 TLVLDMDNTMI-TSWFIKRGKKPKNIPRIAHDFKFYLPAYGATIYVYKRPYLDHFLDRVSKWYDL 135
            |||||::.|:: |.|..:||.:                       .:|||.:|.||:.:.|:|::
plant   192 TLVLDLNETLLYTDWKRERGWR-----------------------TFKRPGVDAFLEHLGKFYEI 233

  Fly   136 TVFTSGAEIYASPILDFLDRGRGILNSRLYRQHCIEQFGKWSKSVLLACPDLSNVVLLDNSSTEC 200
            .|::...|:|..|:.:.|| ..|.:..:|.|.....:.||..:.:.....|...::.:..::.|.
plant   234 VVYSDQMEMYVLPVCEKLD-PNGYIRYKLARGATKYENGKHYRDLSKLNRDPKKILFVSANAFES 297

  Fly   201 SFNAENAILIKSYEIGCRDEALINLLPFLD--ALRFMKDVRSML 242
            :...||::.||.|::...|.||::|:|||:  |.....|:|.:|
plant   298 TLQPENSVPIKPYKLEADDTALVDLIPFLEYVARNSPADIRPVL 341

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12078	NP_647795.2	HIF-SF_euk	70..237	CDD:274055	44/167 (26%)
TIM50	NP_175986.2	NIF	191..338	CDD:397254	45/169 (27%)