Protein Alignment CG12078 and Timm50

DIOPT Version :10

• Sequence 1: NP_647795.2
• Gene: CG12078 / 38401
• FlyBaseID: FBgn0035426
• Length: 253
• Species: Drosophila melanogaster
• Sequence 2: NP_001388606.1
• Gene: Timm50 / 687295
• RGDID: 1587684
• Length: 353
• Species: Rattus norvegicus
• Alignment Length: 262
• Identity: 60/262 - (22%)
• Similarity: 108/262 - (41%)
• Gaps: 47/262 - (17%)

  Fly     9 IIYVFG---LATMGLMMGIACVVIPRLWFFLEKVYRVFVEYTPIIYLSEDRLSPVSKSRLSLVAR 70
            |:|:||   :...|..:.......|.|...|.:.|:.|.:|..:|      :.|.|...|....|
  Rat    82 IVYIFGNNPVDENGTKIPDEFDSDPILVQQLRRTYKYFKDYRQMI------IEPTSPCLLPDPLR 140

  Fly    71 K-------TLVLDMDNTMI-TSWFIKRGKKPKNIPRIAHDFKFYLPAYGATIYVYKRPYLDHFLD 127
            :       ||||::...:: ..|.:..|.:          ||             |||.::....
  Rat   141 EPYYQPPYTLVLELTGVLLHPEWSLATGWR----------FK-------------KRPGIETLFQ 182

  Fly   128 RVSKWYDLTVFTSGAEIYASPILDFLDRGRGILNSRLYRQHCIEQFGKWSKSVLLACPDLSNVVL 192
            :::..|::.:|||...:.|.|::|.:| ..|.::.||:|.......|...|.:.....|.:.||:
  Rat   183 QLAPLYEIVIFTSETGMTAFPLIDSVD-PHGFISYRLFRDATRYMEGHHVKDISCLNRDPARVVV 246

  Fly   193 LDNSSTECSFNAENAILIKSYEIGCRDEALINLLPFLD--ALRFMKDVRSMLKRCT----RFESF 251
            :|...........|.:.::.::....|..|::|..||.  ||..::|||::|:...    ..|:|
  Rat   247 VDCKKEAFRLQPFNGVALRPWDGNSDDRVLLDLSAFLKTIALNQVEDVRTVLEHYALEDDPLEAF 311

  Fly   252 AQ 253
            .|
  Rat   312 KQ 313

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12078	NP_647795.2	HIF-SF_euk	70..237	CDD:274055	38/176 (22%)
Timm50	NP_001388606.1	HAD_FCP1-like	147..262	CDD:319823	30/138 (22%)