DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12078 and Timm50

DIOPT Version :10

Sequence 1:NP_647795.2 Gene:CG12078 / 38401 FlyBaseID:FBgn0035426 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_079892.1 Gene:Timm50 / 66525 MGIID:1913775 Length:353 Species:Mus musculus


Alignment Length:262 Identity:60/262 - (22%)
Similarity:108/262 - (41%) Gaps:47/262 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IIYVFG---LATMGLMMGIACVVIPRLWFFLEKVYRVFVEYTPIIYLSEDRLSPVSKSRLSLVAR 70
            |:|:||   :...|..:.......|.|...|.:.|:.|.:|..:|      :.|.|...|....|
Mouse    82 IVYIFGNNPVDENGTKIPDEFDSDPILVQQLRRTYKYFKDYRQMI------IEPTSPCLLPDPLR 140

  Fly    71 K-------TLVLDMDNTMI-TSWFIKRGKKPKNIPRIAHDFKFYLPAYGATIYVYKRPYLDHFLD 127
            :       ||||::...:: ..|.:..|.:          ||             |||.::....
Mouse   141 EPYYQPPYTLVLELTGVLLHPEWSLATGWR----------FK-------------KRPGIETLFQ 182

  Fly   128 RVSKWYDLTVFTSGAEIYASPILDFLDRGRGILNSRLYRQHCIEQFGKWSKSVLLACPDLSNVVL 192
            :::..|::.:|||...:.|.|::|.:| ..|.::.||:|.......|...|.:.....|.:.||:
Mouse   183 QLAPLYEIVIFTSETGMTAFPLIDSVD-PHGFISYRLFRDATRYMEGHHVKDISCLNRDPARVVV 246

  Fly   193 LDNSSTECSFNAENAILIKSYEIGCRDEALINLLPFLD--ALRFMKDVRSMLKRCT----RFESF 251
            :|...........|.:.::.::....|..|::|..||.  ||..::|||::|:...    ..|:|
Mouse   247 VDCKKEAFRLQPFNGVALRPWDGNSDDRVLLDLSAFLKTIALNQVEDVRTVLEHYALEDDPLEAF 311

  Fly   252 AQ 253
            .|
Mouse   312 KQ 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12078NP_647795.2 HIF-SF_euk 70..237 CDD:274055 38/176 (22%)
Timm50NP_079892.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..59
HAD_FCP1-like 147..262 CDD:319823 30/138 (22%)
Blue background indicates that the domain is not in the aligned region.

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