DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12078 and ctdspl2a

DIOPT Version :10

Sequence 1:NP_647795.2 Gene:CG12078 / 38401 FlyBaseID:FBgn0035426 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001071012.1 Gene:ctdspl2a / 558181 ZFINID:ZDB-GENE-061013-647 Length:469 Species:Danio rerio


Alignment Length:211 Identity:64/211 - (30%)
Similarity:112/211 - (53%) Gaps:18/211 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 FVEYTPIIYLSEDRLSPVSKSRLSLVARKT----LVLDMDNTMITSWFIKRGKKPKNIPRIAHDF 103
            |:::.|  .|:|::|:  .|..|.|..|.|    ||||:|.|::.....:........|.:..|.
Zfish   263 FIKHVP--PLTEEQLT--RKPALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDV 323

  Fly   104 KFYLPAYGATIYVYKRPYLDHFLDRVSKWYDLTVFTSGAEIYASPILDFLDRGRGILNSRLYRQH 168
            .:       .:||..||:...||:|:|:.|::.:||:..::||..:|:.||..:.::..||:|:|
Zfish   324 IY-------QVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREH 381

  Fly   169 CIEQFGKWSKSVLLACPDLSNVVLLDNSSTECSFNAENAILIKSYEIGCRDEALINLLPFLDAL- 232
            |:...|.:.|.:.:...|||..|::|||....::...|.|.|:|:.:...|..|:.|:|||:.| 
Zfish   382 CVCVQGNYIKDLNILGRDLSKTVIIDNSPQAFAYQLSNGIPIESWFVDKNDNELLKLVPFLEKLV 446

  Fly   233 RFMKDVRSMLKRCTRF 248
            ...:|||..::.  ||
Zfish   447 ELNEDVRPYIRE--RF 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12078NP_647795.2 HIF-SF_euk 70..237 CDD:274055 51/171 (30%)
ctdspl2aNP_001071012.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..136
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..209
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 231..250
HIF-SF_euk 290..445 CDD:274055 48/161 (30%)
Blue background indicates that the domain is not in the aligned region.

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