DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12078 and Ublcp1

DIOPT Version :10

Sequence 1:NP_647795.2 Gene:CG12078 / 38401 FlyBaseID:FBgn0035426 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001014139.1 Gene:Ublcp1 / 360514 RGDID:1310386 Length:318 Species:Rattus norvegicus


Alignment Length:191 Identity:36/191 - (18%)
Similarity:70/191 - (36%) Gaps:51/191 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 RKTLVLDMDNTMITSWFIKRGKKPKNIPRIAHDFKFYLPAYGATIYVYKRPYLDHFLDRVSKWYD 134
            :|.||||:|.|:    |..|......:..:                   ||||..||....:.||
  Rat   137 KKLLVLDVDYTL----FDHRSCAETGVELM-------------------RPYLHEFLTSAYEDYD 178

  Fly   135 LTVFTS-------------GAEIYASPILDFLDRGRGILNSRLYRQHCIEQ------FGKWSKSV 180
            :.::::             |....|:..:.|:.....::.....|:..|:.      :||:|:..
  Rat   179 IVIWSATNMKWIEAKMKELGVSTNANYKITFMLDSAAMITVHTPRRGLIDVKPLGVIWGKFSEFY 243

  Fly   181 LLACPDLSNVVLLDNSSTECSFNAENAILI----KSYEIGCRDEALINLLPFLDALRFMKD 237
                 ...|.::.|:.......|.:|.:.|    |::....:|:.|:.|..:|..:..:.|
  Rat   244 -----SKKNTIMFDDIGRNFLMNPQNGLKIRPFMKAHLNRDKDKELVKLTQYLKEIAKLDD 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12078NP_647795.2 HIF-SF_euk 70..237 CDD:274055 35/189 (19%)
Ublcp1NP_001014139.1 Ubl_UBLCP1 3..77 CDD:340511
HAD_IIID1 117..311 CDD:131299 36/191 (19%)
Blue background indicates that the domain is not in the aligned region.

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