DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12078 and psr1

DIOPT Version :10

Sequence 1:NP_647795.2 Gene:CG12078 / 38401 FlyBaseID:FBgn0035426 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_592973.1 Gene:psr1 / 2541901 PomBaseID:SPAC2F7.02C Length:325 Species:Schizosaccharomyces pombe


Alignment Length:192 Identity:57/192 - (29%)
Similarity:99/192 - (51%) Gaps:23/192 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LSPVSKSRLSLVARKTLVLDMDNTMITSWFIKRGKKPKN------IPRIAHDFKFYLPAYGATIY 115
            |.|::|..   ..:|.|:||:|.|::.|.|  :..:|.:      |..:.||           :.
pombe   147 LPPIAKED---EGKKCLILDLDETLVHSSF--KYIEPADFVVSIEIDGLQHD-----------VR 195

  Fly   116 VYKRPYLDHFLDRVSKWYDLTVFTSGAEIYASPILDFLDRGRGILNSRLYRQHCIEQFGKWSKSV 180
            |.|||.:|.||.::...:::.|||:....||.|:||.||... ::..||:|:.|....|.:.|.:
pombe   196 VVKRPGVDEFLKKMGDMFEIVVFTASLAKYADPVLDMLDHSH-VIRHRLFREACCNYEGNFVKDL 259

  Fly   181 LLACPDLSNVVLLDNSSTECSFNAENAILIKSYEIGCRDEALINLLPFLDALRFMKDVRSML 242
            .....:|.:.:::|||.:...|:..:|:.|.|:.....|..||:|:|||:.|..:.||.::|
pombe   260 SQLGRNLEDSIIIDNSPSSYIFHPSHAVPISSWFNDMHDMELIDLIPFLEHLARVPDVSTVL 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12078NP_647795.2 HIF-SF_euk 70..237 CDD:274055 51/172 (30%)
psr1NP_592973.1 NIF 158..317 CDD:397254 51/172 (30%)

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