DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17746 and pdp1

DIOPT Version :9

Sequence 1:NP_647794.1 Gene:CG17746 / 38400 FlyBaseID:FBgn0035425 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_001104628.1 Gene:pdp1 / 558728 ZFINID:ZDB-GENE-060810-70 Length:519 Species:Danio rerio


Alignment Length:290 Identity:65/290 - (22%)
Similarity:98/290 - (33%) Gaps:106/290 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 FAVYDGHGGATVAQYAGKHLHKYV----------------------------------------- 78
            :.|:|||.|...||...:.|..|:                                         
Zfish   127 YGVFDGHAGCACAQALSERLFYYIAVSLLPHETLIELENAVENGRPLHPILQWHKHPNDYFSKEA 191

  Fly    79 -----------------LKRPEYNDNIEQALQQGFLDIDYVMLRNKTCGDQMA------------ 114
                             |..|.....:.:||...|..:|..:......||..|            
Zfish   192 SRLYFSSLRTYWQELLDLSVPGEQPEVAEALVTAFKRLDNDISLEAQVGDPNAFLHYWVLRVAFS 256

  Fly   115 GSTAVVVLVKDNKLYCANAGDSRAIACV---NGQLEVLSL--DHKPNNEAESKRI------IQGG 168
            |:||.|..:..|:|:.||.||.||:..|   :|....|:|  ||...||:|.:|:      .:..
Zfish   257 GATACVAHIDGNELHVANTGDGRAVLGVQEPDGSFSALTLTNDHNAQNESEVQRVRSEHPHSEAK 321

  Fly   169 GWVEFNRVNGNLALSRALGDYVFK-----------------HENKKPE--------DQIVTAFPD 208
            ..|:.:|:.|.|...||.||..||                 |||:..:        ...:||.|:
Zfish   322 TVVKQDRLLGLLMPFRAFGDVKFKWSIELQRRVLESGPDQLHENEHAKFIPPNYHTPPYLTAEPE 386

  Fly   209 VETRKIMDDWEFIVLACDGIWDVMSNAEVL 238
            |...::.....|:||..||:|:.:...||:
Zfish   387 VTRHRLRPQDRFLVLGSDGLWETLHRQEVV 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17746NP_647794.1 PP2Cc 22..284 CDD:238083 65/290 (22%)
pdp1NP_001104628.1 PP2Cc 96..511 CDD:238083 65/290 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.