DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17746 and Ppm1k

DIOPT Version :9

Sequence 1:NP_647794.1 Gene:CG17746 / 38400 FlyBaseID:FBgn0035425 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_001101333.1 Gene:Ppm1k / 312381 RGDID:1308501 Length:372 Species:Rattus norvegicus


Alignment Length:275 Identity:87/275 - (31%)
Similarity:129/275 - (46%) Gaps:41/275 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 VGSSCMQGWRINMEDSHTHILSLPDDPGAAFFAVYDGHGGATVAQYAGKHLHKYVLKRPEYNDNI 88
            ||.:.:.|.|...|| ......|.::  ..:|||||||||...|.:...|:.|.|........::
  Rat    95 VGCASLIGKRKENED-RFGFAQLTEE--VLYFAVYDGHGGPAAADFCHTHMEKCVTDLLPREKDL 156

  Fly    89 EQALQQGFLDID-----YVMLRNKTCGDQMAGSTAVVVLVKDN-KLYCANAGDSRAIACVNGQLE 147
            |..|...||:||     |..| :.......:|:||.|.|::|. :|..|:.|||||:.|..|:..
  Rat   157 ETVLTLAFLEIDKAFSSYAHL-SADASLLTSGTTATVALLRDGVELVVASVGDSRALLCRKGKPM 220

  Fly   148 VLSLDHKPNNEAESKRIIQGGGWVEFN-----RVNGNLALSRALGDYVFKHENKKPEDQIVTAFP 207
            .|:.||.|..:.|.:||.:.||:|.:|     .|||.||::|::||...|...       |.|.|
  Rat   221 KLTTDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKASG-------VIAEP 278

  Fly   208 DVETRKI--MDDWEFIVLACDGIWDVMSNAEVLEF---CRTRIGMGMFPEEICEELMNHCLAPDC 267
            :....|:  .|| .|:||..|||..::::.|:.:|   |..       |:|....:....:    
  Rat   279 ETTRIKLYHADD-SFLVLTTDGINFMVNSQEICDFVNQCHD-------PKEAAHAVTEQAI---- 331

  Fly   268 QMGGLGGDNMTVVLV 282
            |.|  ..||.|.|:|
  Rat   332 QYG--TEDNSTAVVV 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17746NP_647794.1 PP2Cc 22..284 CDD:238083 87/275 (32%)
Ppm1kNP_001101333.1 PP2Cc 95..346 CDD:238083 87/275 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53745
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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