DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17746 and ptc2

DIOPT Version :9

Sequence 1:NP_647794.1 Gene:CG17746 / 38400 FlyBaseID:FBgn0035425 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_588356.1 Gene:ptc2 / 2539252 PomBaseID:SPCC1223.11 Length:370 Species:Schizosaccharomyces pombe


Alignment Length:361 Identity:151/361 - (41%)
Similarity:209/361 - (57%) Gaps:29/361 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGQTLSEPVTAKESAYCQNAAYRVGSSCMQGWRINMEDSHTHILSLPD----DPGAAFFAVYDGH 61
            |||||||||..|.|:...:.....|.|.||||||:|||:|..:|:..|    :|..:||.|:|||
pombe     1 MGQTLSEPVLDKHSSSGGDRWLHFGVSHMQGWRISMEDAHCALLNFTDSNSSNPPTSFFGVFDGH 65

  Fly    62 GGATVAQYAGKHLHKYVLKRPEY-NDNIEQALQQGFLDIDYVMLRNKTCGDQMAGSTAVVVLVKD 125
            ||..||:|..:||...:..:|.: ..|.::||:.|||..|..:::::...:..:|.||...|:.|
pombe    66 GGDRVAKYCRQHLPDIIKSQPSFWKGNYDEALKSGFLAADNALMQDRDMQEDPSGCTATTALIVD 130

  Fly   126 NK-LYCANAGDSRAIACVNGQLEVLSLDHKPNNEAESKRIIQGGGWVEFNRVNGNLALSRALGDY 189
            :: :|||||||||.:....|..|.||.||||||:.|..||...||:::|.||||:||||||:||:
pombe   131 HQVIYCANAGDSRTVLGRKGTAEPLSFDHKPNNDVEKARITAAGGFIDFGRVNGSLALSRAIGDF 195

  Fly   190 VFKHENK-KPEDQIVTAFPDVETRKIMDDWEFIVLACDGIWDVMSNAEVLEFCRTRIGMGMFPEE 253
            .:|.::. .||.|||||||||....|..|.||::||||||||..|:.:|:||.|..|......|.
pombe   196 EYKKDSSLPPEKQIVTAFPDVVIHNIDPDDEFLILACDGIWDCKSSQQVVEFVRRGIVARQSLEV 260

  Fly   254 ICEELMNHCLAPDCQMGGLGGDNMTVVLVCLLHGRPYSD----LIARCRNG-------SQATNND 307
            |||.||:.|:|.:.:..|:|.||||:.:|..||||...|    :..|..:|       |.|....
pombe   261 ICENLMDRCIASNSESCGIGCDNMTICIVAFLHGRGLEDWYNWITQRVNSGEGPCAPPSYAELRG 325

  Fly   308 QEEAGDATK-----DEVAK------DEAEAETDTET 332
            .....||..     |.:|.      |..::::|.||
pombe   326 PNTIADARNLQLEYDHIASHEYGSGDTYDSDSDDET 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17746NP_647794.1 PP2Cc 22..284 CDD:238083 123/268 (46%)
ptc2NP_588356.1 PP2C 22..278 CDD:278884 116/255 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 238 1.000 Domainoid score I468
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H121823
Inparanoid 1 1.050 277 1.000 Inparanoid score I683
OMA 1 1.010 - - QHG53745
OrthoFinder 1 1.000 - - FOG0000692
OrthoInspector 1 1.000 - - mtm9303
orthoMCL 1 0.900 - - OOG6_100270
Panther 1 1.100 - - O PTHR13832
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R955
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.860

Return to query results.
Submit another query.