DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17746 and fem-2

DIOPT Version :9

Sequence 1:NP_647794.1 Gene:CG17746 / 38400 FlyBaseID:FBgn0035425 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_497224.1 Gene:fem-2 / 175217 WormBaseID:WBGene00001412 Length:449 Species:Caenorhabditis elegans


Alignment Length:315 Identity:92/315 - (29%)
Similarity:138/315 - (43%) Gaps:48/315 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 VGSSCMQGWRINMEDSHTHILSLP--------DDPGAAFFAVYDGHGGATVAQYAGKHLHK---Y 77
            |....::|.|...||   ..|:.|        :|| .:..||:|||||...:|||..||.:   .
 Worm   163 VSGDQLKGQRHKQED---RFLAYPNGQYMDRGEDP-ISVLAVFDGHGGHECSQYAAGHLWETWLE 223

  Fly    78 VLKRPEYNDNIEQALQQG--FLDIDYVMLRNKTCGDQMAGSTAVVVLV-KDNKLYC-ANAGDSRA 138
            |.|..:.:|::|..|::.  .||....:...|.|  ...|||||...: .|.||.. |..|||..
 Worm   224 VRKSRDPSDSLEDQLRKSLELLDERMTVRSVKEC--WKGGSTAVCCAIDMDQKLMALAWLGDSPG 286

  Fly   139 IACVNGQLEVLSLDHKPNNEAESKRIIQGGGWV-----EFNRVNGNLALSRALGDYVFKHENKKP 198
            ....|.:...|:..|.|::|.|::|:.:.||.:     |. ||||.|.|:|||||.        |
 Worm   287 YVMSNIEFRQLTRGHSPSDEREARRVEEAGGQLFVIGGEL-RVNGVLNLTRALGDV--------P 342

  Fly   199 EDQIVTAFPDVETRKIMDDWEFIVLACDGIWDVMSNAEVLEFCRTRIGMGMFPEEICEELMNHCL 263
            ...:::..|:.....|......::||||||.||.:..::.:.  .......:|.|...||.....
 Worm   343 GRPMISNEPETCQVPIESSDYLVLLACDGISDVFNERDLYQL--VEAFANDYPVEDYAELSRFIC 405

  Fly   264 APDCQMGGLGGDNMTVVLVCLLHGRPYSDLIARCRNGSQATNNDQEEAGDATKDE 318
            ....:.|  ..||::||:..|   ||..|:....::.|      .:|..|.|.:|
 Worm   406 TKAIEAG--SADNVSVVIGFL---RPPQDVWKLMKHES------DDEDSDVTDEE 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17746NP_647794.1 PP2Cc 22..284 CDD:238083 83/279 (30%)
fem-2NP_497224.1 PP2C 161..417 CDD:278884 80/272 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R955
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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