Sequence 1: | NP_647793.1 | Gene: | Larp4B / 38399 | FlyBaseID: | FBgn0035424 | Length: | 1531 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001190354.1 | Gene: | LARP1a / 832242 | AraportID: | AT5G21160 | Length: | 833 | Species: | Arabidopsis thaliana |
Alignment Length: | 736 | Identity: | 148/736 - (20%) |
---|---|---|---|
Similarity: | 235/736 - (31%) | Gaps: | 214/736 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 434 KNGYRLTSPPTANVFDPA-GAGGATVSYAAAQQPRYLYTNGAAIAAPASVQYSNPVLIPIP---- 493
Fly 494 -----------------------------QNQFYPGLVAGPWPPGTVAATTAHGQNFYEL----- 524
Fly 525 -GGNIFTTNPLPPQPVTAGFAQAPPPTS-------QAM----VTPKPQGG-GRYNNNHRG-NPNN 575
Fly 576 VGGANSGPRAESRSKPPRSTPSASHIQG---GNIMPI-QITAPIPGGMVSVVPTNIVQDPLQPAP 636
Fly 637 LQQQPQ------QVIQQIQQQPSSSAQQQQAATVQMNNTTRHYPIK--SNWKGGMQKNLDKSYSG 693
Fly 694 GVATHHHYTTQVQALPAHSHHLQAQ-QQLQGQTQQQHYQLASSSAASAPQVTYVTTAPAPQQPGQ 757
Fly 758 HQHHLVVQQTQPQQQQQQQQVVLQQQQVQVQELQEAGDGVEHSSHAMQQVNRSSNMSASSSSSLA 822
Fly 823 TSMSKEPLQ-----------WQNRPRRRRR--------------DEEGGINYSPGGRVGLYGSSP 862
Fly 863 SNPHPQQHLMSSSTGSN-----VQSAGGTDGGGASHRGGERQSHY-----NTIHD-------VPP 910
Fly 911 PQHRGNYKGNNYNPHYHAQHSSMASGSHHH---HHHNALSSQQQQHHLTTGTGQQGSGHHYHH-H 971
Fly 972 HHHNSIGSNVGNSGGLGVSSGGSGGGGSGGGSGSNS---------------LSGGSNERG-IHHS 1020
Fly 1021 SLGYQGHQHQHQQQQQQQQQQ 1041 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Larp4B | NP_647793.1 | LARP_4_5_like | 269..343 | CDD:153400 | |
RRM_LARP4_5_like | 348..423 | CDD:240876 | |||
LARP1a | NP_001190354.1 | LAM | 279..351 | CDD:153396 | 13/84 (15%) |
DM15 | 670..710 | CDD:128927 | 1/5 (20%) | ||
DM15 | 712..749 | CDD:128927 | |||
DM15 | 750..785 | CDD:128927 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |