Sequence 1: | NP_647793.1 | Gene: | Larp4B / 38399 | FlyBaseID: | FBgn0035424 | Length: | 1531 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_567991.1 | Gene: | LARP1c / 829743 | AraportID: | AT4G35890 | Length: | 523 | Species: | Arabidopsis thaliana |
Alignment Length: | 378 | Identity: | 90/378 - (23%) |
---|---|---|---|
Similarity: | 149/378 - (39%) | Gaps: | 88/378 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 21 PVYTNVPVETAMLATNLFGATTQIAASPAAAAAAHIPLITAAAAAAAAAG-APAVAPPVAVAPVA 84
Fly 85 TASAAQAAVVPAQQQQQAHPHQAQILAHTHVAHQQQQQQQQQ---------TIQQHLHQ------ 134
Fly 135 ---------QQQQQ---------SPHPAQHLTYGHQPALSQATAGGSGTISGGAVGPSGVVVEGQ 181
Fly 182 DTNEYAIMNGALG--QTQDGT--VVCYTTDALNN-TNLVALDPQPHQIVVPVQ---------VPV 232
Fly 233 QVPVPVQLPANGSADPQQGSHNAAGGEEPNIPLDKLKQMLATQLEYYFSRENLANDTYLLSQMDS 297
Fly 298 DQYVPIYTVARFNLVRKLTNDINLITEVLRESPNVQVDDKGLRVRPNRKRCII 350 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Larp4B | NP_647793.1 | LARP_4_5_like | 269..343 | CDD:153400 | 30/73 (41%) |
RRM_LARP4_5_like | 348..423 | CDD:240876 | 0/3 (0%) | ||
LARP1c | NP_567991.1 | LHP1 | <182..448 | CDD:227520 | 73/299 (24%) |
LAM | 372..442 | CDD:153396 | 29/69 (42%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | oto4235 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |